RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 ADHFE1Q8IWW8 467 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 CMTR1Q8N1G2 835 aaKnown RBP12.58□□□□□ -0.4
COL11A1-207ENST00000465209 FIBCD1Q8N539 461 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 GIMAP8Q8ND71 665 aaPredicted RBP12.58□□□□□ -0.4
COL11A1-207ENST00000465209 SEPT1Q8WYJ6 367 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 ZBTB10Q96DT7 871 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 LMAN2LQ9H0V9 348 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 CLDND1Q9NY35 253 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 ERAP1Q9NZ08 941 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 RBM8AQ9Y5S9 174 aaKnown RBP12.58□□□□□ -0.4
COL11A1-207ENST00000465209 CDY2AQ9Y6F7 541 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 WDR81Q562E7 1941 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 DCXO43602 365 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 DGKIO75912 1065 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 MMP1P03956 469 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 ALADP13716 330 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 RXRAP19793 462 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 MARK3P27448 753 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 KIF5BP33176 963 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 GTF2F1P35269 517 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL11A1-207ENST00000465209 SMAD2Q15796 467 aaKnown RBP12.57□□□□□ -0.4
COL11A1-207ENST00000465209 UBE2SQ16763 222 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 RTN4RL1Q86UN2 441 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-207ENST00000465209 CTCFLQ8NI51 663 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-207ENST00000465209 DNAJB3Q8WWF6 145 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 CUL5Q93034 780 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 CDHR1Q96JP9 859 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 LZTS2Q9BRK4 669 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 C11orf84Q9BUA3 381 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-207ENST00000465209 RWDD3Q9Y3V2 267 aa12.57□□□□□ -0.4
COL11A1-207ENST00000465209 EVPLQ92817 2033 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 LINC01565O15544 149 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 MBTPS2O43462 519 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 PRC1O43663 620 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 DNAJB1P25685 340 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 IRS1P35568 1242 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 MRPS6P82932 125 aaKnown RBP12.56□□□□□ -0.4
COL11A1-207ENST00000465209 MTMR1Q13613 665 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 TYW1BQ6NUM6 668 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 TMTC3Q6ZXV5 915 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 PLVAPQ9BX97 442 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 LSG1Q9H089 658 aaKnown RBP12.56□□□□□ -0.4
COL11A1-207ENST00000465209 PSTPIP2Q9H939 334 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 JADE2Q9NQC1 790 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 SEC63Q9UGP8 760 aaKnown RBP12.56□□□□□ -0.4
COL11A1-207ENST00000465209 SQORQ9Y6N5 450 aa12.56□□□□□ -0.4
COL11A1-207ENST00000465209 hCG_1642624A0A1W2PR95 340 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 NCK2O43639 380 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 INSRRP14616 1297 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 CD52P31358 61 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 LIFRP42702 1097 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 CMTR2Q8IYT2 770 aaKnown RBP12.55□□□□□ -0.4
COL11A1-207ENST00000465209 CYP2W1Q8TAV3 490 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 P2RX5Q93086 422 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 TMEM87BQ96K49 555 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 MSLNLQ96KJ4 702 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 SMARCAD1Q9H4L7 1026 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 PKD2L1Q9P0L9 805 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 PCDHA6Q9UN73 950 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 PLAGL2Q9UPG8 496 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 PCDHA8Q9Y5H6 950 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 MRPL42Q9Y6G3 142 aaKnown RBP12.55□□□□□ -0.4
COL11A1-207ENST00000465209 CNTNAP5Q8WYK1 1306 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 IGSF9BQ9UPX0 1349 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 KMT2EQ8IZD2 1858 aa12.55□□□□□ -0.4
COL11A1-207ENST00000465209 MAFGO15525 162 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 ITGB1P05556 798 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 MCM5P33992 734 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 GNAQP50148 359 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 FUT2Q10981 343 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 ITGB3BPQ13352 177 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-207ENST00000465209 ADAM15Q13444 863 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 SMAD4Q13485 552 aaKnown RBP12.54□□□□□ -0.4
COL11A1-207ENST00000465209 BTG3Q14201 252 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-207ENST00000465209 CLUL1Q15846 466 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 ADGRD2Q7Z7M1 963 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 RSPH3Q86UC2 560 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 SGMS1Q86VZ5 419 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 RAB11FIP4Q86YS3 637 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 GLG1Q92896 1179 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 TMX1Q9H3N1 280 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 JPH1Q9HDC5 661 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-207ENST00000465209 ALG13Q9NP73 1137 aaKnown RBP12.54□□□□□ -0.4
COL11A1-207ENST00000465209 KCNH7Q9NS40 1196 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 SLC9A2Q9UBY0 812 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 FAM50BQ9Y247 325 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 NFASCO94856 1347 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 KDM3AQ9Y4C1 1321 aa12.54□□□□□ -0.4
COL11A1-207ENST00000465209 IGKV6D-21A0A0A0MT36 114 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 RRN3P2A6NIE6 340 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 SLC27A2O14975 620 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 ATG7O95352 703 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 EYA4O95677 639 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 GLP2RO95838 553 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 RPLP2P05387 115 aaKnown RBP12.53□□□□□ -0.4
COL11A1-207ENST00000465209 IGBP1P78318 339 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 PLCB4Q15147 1175 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 NECTIN1Q15223 517 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 HERC4Q5GLZ8 1057 aaPredicted RBP12.53□□□□□ -0.4
COL11A1-207ENST00000465209 WWC2Q6AWC2 1192 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms