RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 IFIH1Q9BYX4 1025 aaKnown RBP16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 OSBPL7Q9BZF2 842 aa16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 AZI2Q9H6S1 392 aa16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 SUGCTQ9HAC7 445 aa16.4■□□□□ 0.22
SNRNP40-203ENST00000463988 NID2Q14112 1375 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 ESYT2A0FGR8 921 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 SCG2P13521 617 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 MARK3P27448 753 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 ADD1P35611 737 aaKnown RBP16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 ACTR2P61160 394 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 MGAT3Q09327 533 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 KRT40Q6A162 431 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 BLOC1S2Q6QNY1 142 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 Q6ZUG5 572 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 ADAMTS19Q8TE59 1207 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 CCDC136Q96JN2 1154 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 JAKMIP1Q96N16 626 aaKnown RBP16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 SAMD11Q96NU1 681 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 PCYT2Q99447 389 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 AGXT2Q9BYV1 514 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 AGO4Q9HCK5 861 aaKnown RBP16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 SNX14Q9Y5W7 946 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 REV3LO60673 3130 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 BRWD1Q9NSI6 2320 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 MUC3AQ02505 3323 aa16.39■□□□□ 0.21
SNRNP40-203ENST00000463988 COL4A6Q14031 1691 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 REC8O95072 547 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 ATG7O95352 703 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 CYP3A4P08684 503 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 ARP10275 920 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 BMP1P13497 986 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 INSRRP14616 1297 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 SLC26A2P50443 739 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 APOBRQ0VD83 1088 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 ITGB3BPQ13352 177 aaPredicted RBP16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 GDPD5Q8WTR4 605 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 CCDC12Q8WUD4 166 aaPredicted RBP16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 BRF1Q92994 677 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 PGBD1Q96JS3 809 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 MTUS1Q9ULD2 1270 aa16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 NAP1L2Q9ULW6 460 aaPredicted RBP16.38■□□□□ 0.21
SNRNP40-203ENST00000463988 PRPF3O43395 683 aaKnown RBP16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 EPB41L2O43491 1005 aaKnown RBP16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 CPA1P15085 419 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 RPS6KB1P23443 525 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 PSMA5P28066 241 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 ZNF76P36508 570 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 STAT5BP51692 787 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 TFF2Q03403 129 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 LPIN1Q14693 890 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 FBXO22Q8NEZ5 403 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 DNAJB3Q8WWF6 145 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 CRYGNQ8WXF5 182 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 HLA-CQ95604 372 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 UHRF1Q96T88 793 aaPredicted RBP16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 YME1L1Q96TA2 773 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 ZMYND12Q9H0C1 365 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 C6orf50Q9HD87 102 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 TMEM260Q9NX78 707 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 SQORQ9Y6N5 450 aa16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 COL4A4P53420 1690 aaPredicted RBP16.37■□□□□ 0.21
SNRNP40-203ENST00000463988 SIP14410 1827 aa16.36■□□□□ 0.21
SNRNP40-203ENST00000463988 IGKV6D-21A0A0A0MT36 114 aa16.36■□□□□ 0.21
SNRNP40-203ENST00000463988 GHRP10912 638 aa16.36■□□□□ 0.21
SNRNP40-203ENST00000463988 EVCP57679 992 aa16.36■□□□□ 0.21
SNRNP40-203ENST00000463988 MRPS6P82932 125 aaKnown RBP16.36■□□□□ 0.21
SNRNP40-203ENST00000463988 PLCB4Q15147 1175 aa16.36■□□□□ 0.21
SNRNP40-203ENST00000463988 FBXO47Q5MNV8 452 aa16.36■□□□□ 0.21
SNRNP40-203ENST00000463988 IER5Q5VY09 327 aa16.36■□□□□ 0.21
SNRNP40-203ENST00000463988 FAM43BQ6ZT52 329 aaPredicted RBP16.36■□□□□ 0.21
SNRNP40-203ENST00000463988 C17orf80Q9BSJ5 609 aa16.36■□□□□ 0.21
SNRNP40-203ENST00000463988 TRPC6Q9Y210 931 aa16.36■□□□□ 0.21
SNRNP40-203ENST00000463988 PCDHA2Q9Y5H9 948 aa16.36■□□□□ 0.21
SNRNP40-203ENST00000463988 XIRP2A4UGR9 3374 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 POTEB3A0JP26 581 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 FAM86B1E9PN63 330 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 RBAK-RBAKDNI3L0D1 243 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 UPP2O95045 317 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 FAM86B2P0C5J1 330 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 GNA11P29992 359 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 IGBP1P78318 339 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 PKN1Q16512 942 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 JAKMIP3Q5VZ66 844 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 POTEBQ6S5H4 581 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 ABHD15Q6UXT9 468 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 TSHZ1Q6ZSZ6 1077 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 PLA2G4DQ86XP0 818 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 REXO1Q8N1G1 1221 aaKnown RBP16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 IL17RAQ96F46 866 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 CDY2AQ9Y6F7 541 aa16.35■□□□□ 0.21
SNRNP40-203ENST00000463988 IGLV3-22A0A075B6J6 115 aa16.34■□□□□ 0.21
SNRNP40-203ENST00000463988 ENPP3O14638 875 aa16.34■□□□□ 0.21
SNRNP40-203ENST00000463988 DHX15O43143 795 aaKnown RBP16.34■□□□□ 0.21
SNRNP40-203ENST00000463988 CCNE2O96020 404 aa16.34■□□□□ 0.21
SNRNP40-203ENST00000463988 AKAP17AQ02040 695 aaKnown RBP16.34■□□□□ 0.21
SNRNP40-203ENST00000463988 NTRK3Q16288 839 aa16.34■□□□□ 0.21
SNRNP40-203ENST00000463988 PTPROQ16827 1216 aa16.34■□□□□ 0.21
SNRNP40-203ENST00000463988 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
SNRNP40-203ENST00000463988 FAM160B1Q5W0V3 765 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms