RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 RAD51AP2Q09MP3 1159 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 SREBF2Q12772 1141 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 EEPD1Q7L9B9 569 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 GPR142Q7Z601 462 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 NELFBQ8WX92 580 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 HHIPL1Q96JK4 782 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 HSD3B7Q9H2F3 369 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 FANCLQ9NW38 375 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 CPA4Q9UI42 421 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 RWDD2AQ9UIY3 292 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 ASB14A6NK59 587 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 PSMA7O14818 248 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 LYPLA2O95372 231 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 UBA1P22314 1058 aaKnown RBP21.15■□□□□ 0.98
CCDC78-206ENST00000463539 PPP1R2P41236 205 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 PSMC5P62195 406 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 SP2Q02086 613 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 CACNB1Q02641 598 aaPredicted RBP21.15■□□□□ 0.98
CCDC78-206ENST00000463539 EHHADHQ08426 723 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 COASYQ13057 564 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 PSMD2Q13200 908 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 MORC4Q8TE76 937 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 HPS3Q969F9 1004 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 RUSC1Q9BVN2 902 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 BCAS3Q9H6U6 928 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 ZBTB39O15060 712 aa21.14■□□□□ 0.97
CCDC78-206ENST00000463539 TGFB3P10600 412 aa21.14■□□□□ 0.97
CCDC78-206ENST00000463539 SP4Q02446 784 aa21.14■□□□□ 0.97
CCDC78-206ENST00000463539 ZNF792Q3KQV3 632 aa21.14■□□□□ 0.97
CCDC78-206ENST00000463539 SPATA1Q5VX52 437 aa21.14■□□□□ 0.97
CCDC78-206ENST00000463539 CYFIP1Q7L576 1253 aa21.14■□□□□ 0.97
CCDC78-206ENST00000463539 KIAA0895Q8NCT3 520 aa21.14■□□□□ 0.97
CCDC78-206ENST00000463539 REEP2Q9BRK0 252 aa21.14■□□□□ 0.97
CCDC78-206ENST00000463539 SLC39A2Q9NP94 309 aa21.14■□□□□ 0.97
CCDC78-206ENST00000463539 FRMD3A2A2Y4 597 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 SORBS3O60504 671 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 PSAPP07602 524 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 ZNF75DP51815 510 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 ACTR2P61160 394 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 GIT2Q14161 759 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 UGCGQ16739 394 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 COBLL1Q53SF7 1204 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 RINT1Q6NUQ1 792 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 PAXIP1Q6ZW49 1069 aaPredicted RBP21.13■□□□□ 0.97
CCDC78-206ENST00000463539 PLEKHH3Q7Z736 793 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 KCND2Q9NZV8 630 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 ARHGEF35A5YM69 484 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 COBLO75128 1261 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 TBCAO75347 108 aaKnown RBP21.13■□□□□ 0.97
CCDC78-206ENST00000463539 GRB14Q14449 540 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 NEDD9Q14511 834 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 FAM26FQ5R3K3 315 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 KCNV1Q6PIU1 500 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 C4orf19Q8IY42 314 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 ATP6V0A1Q93050 837 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 DHTKD1Q96HY7 919 aaPredicted RBP21.13■□□□□ 0.97
CCDC78-206ENST00000463539 ZHX3Q9H4I2 956 aa21.13■□□□□ 0.97
CCDC78-206ENST00000463539 ATP1A3P13637 1013 aa21.12■□□□□ 0.97
CCDC78-206ENST00000463539 YWHABP31946 246 aaKnown RBP21.12■□□□□ 0.97
CCDC78-206ENST00000463539 TPD52L1Q16890 204 aaPredicted RBP21.12■□□□□ 0.97
CCDC78-206ENST00000463539 HERC4Q5GLZ8 1057 aaPredicted RBP21.12■□□□□ 0.97
CCDC78-206ENST00000463539 MIS18BP1Q6P0N0 1132 aa21.12■□□□□ 0.97
CCDC78-206ENST00000463539 FBXO16Q8IX29 292 aaPredicted RBP21.12■□□□□ 0.97
CCDC78-206ENST00000463539 CCDC43Q96MW1 224 aaKnown RBP21.12■□□□□ 0.97
CCDC78-206ENST00000463539 DBR1Q9UK59 544 aaKnown RBP21.12■□□□□ 0.97
CCDC78-206ENST00000463539 LRRC37A2A6NM11 1700 aa21.11■□□□□ 0.97
CCDC78-206ENST00000463539 DKC1O60832 514 aaKnown RBP eCLIP21.11■□□□□ 0.97
CCDC78-206ENST00000463539 GRM1Q13255 1194 aa21.11■□□□□ 0.97
CCDC78-206ENST00000463539 ABHD15Q6UXT9 468 aa21.11■□□□□ 0.97
CCDC78-206ENST00000463539 C1orf186Q6ZWK4 172 aa21.11■□□□□ 0.97
CCDC78-206ENST00000463539 ARMCX2Q7L311 632 aa21.11■□□□□ 0.97
CCDC78-206ENST00000463539 DPP9Q86TI2 863 aa21.11■□□□□ 0.97
CCDC78-206ENST00000463539 GABBR1Q9UBS5 961 aa21.11■□□□□ 0.97
CCDC78-206ENST00000463539 TLR2O60603 784 aa21.11■□□□□ 0.97
CCDC78-206ENST00000463539 ZNF18P17022 549 aa21.11■□□□□ 0.97
CCDC78-206ENST00000463539 ZNF467Q7Z7K2 595 aaPredicted RBP21.11■□□□□ 0.97
CCDC78-206ENST00000463539 ZFYVE28Q9HCC9 887 aa21.11■□□□□ 0.97
CCDC78-206ENST00000463539 TELO2Q9Y4R8 837 aa21.11■□□□□ 0.97
CCDC78-206ENST00000463539 FARP2O94887 1054 aaPredicted RBP21.1■□□□□ 0.97
CCDC78-206ENST00000463539 SUPT20HL2P0C7V6 817 aa21.1■□□□□ 0.97
CCDC78-206ENST00000463539 RARRES1P49788 294 aa21.1■□□□□ 0.97
CCDC78-206ENST00000463539 HSP90AA4PQ58FG1 418 aa21.1■□□□□ 0.97
CCDC78-206ENST00000463539 SWSAP1Q6NVH7 229 aa21.1■□□□□ 0.97
CCDC78-206ENST00000463539 GUF1Q8N442 669 aaKnown RBP21.1■□□□□ 0.97
CCDC78-206ENST00000463539 MRFAP1L1Q96HT8 127 aa21.1■□□□□ 0.97
CCDC78-206ENST00000463539 SAMSN1Q9NSI8 373 aaKnown RBP21.1■□□□□ 0.97
CCDC78-206ENST00000463539 DDX41Q9UJV9 622 aaKnown RBP21.1■□□□□ 0.97
CCDC78-206ENST00000463539 COL4A3BPQ9Y5P4 624 aa21.1■□□□□ 0.97
CCDC78-206ENST00000463539 BICDL2A1A5D9 508 aa21.09■□□□□ 0.97
CCDC78-206ENST00000463539 SLC15A5A6NIM6 579 aa21.09■□□□□ 0.97
CCDC78-206ENST00000463539 BACH1O14867 736 aa21.09■□□□□ 0.97
CCDC78-206ENST00000463539 GGPS1O95749 300 aa21.09■□□□□ 0.97
CCDC78-206ENST00000463539 SERPINC1P01008 464 aa21.09■□□□□ 0.97
CCDC78-206ENST00000463539 CDK11BP21127 795 aaKnown RBP21.09■□□□□ 0.97
CCDC78-206ENST00000463539 FANCCQ00597 558 aa21.09■□□□□ 0.97
CCDC78-206ENST00000463539 LY6KQ17RY6 165 aa21.09■□□□□ 0.97
CCDC78-206ENST00000463539 PADI6Q6TGC4 694 aa21.09■□□□□ 0.97
CCDC78-206ENST00000463539 C17orf99Q6UX52 265 aa21.09■□□□□ 0.97
CCDC78-206ENST00000463539 METTL7BQ6UX53 244 aa21.09■□□□□ 0.97
CCDC78-206ENST00000463539 CCDC60Q8IWA6 550 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms