RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 NONOQ15233 471 aaKnown RBP eCLIP11.05□□□□□ -0.64
PTPRD-207ENST00000463477 QRICH1Q2TAL8 776 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 NAALADL2Q58DX5 795 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 HEATR3Q7Z4Q2 680 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 FBXO11Q86XK2 927 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 ANKLE1Q8NAG6 615 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 TRPV1Q8NER1 839 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 FGD4Q96M96 766 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 SEC63Q9UGP8 760 aaKnown RBP11.05□□□□□ -0.64
PTPRD-207ENST00000463477 DDX20Q9UHI6 824 aaKnown RBP11.05□□□□□ -0.64
PTPRD-207ENST00000463477 PPP2R2CQ9Y2T4 447 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 SMCHD1A6NHR9 2005 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 RBBP6Q7Z6E9 1792 aaKnown RBP11.05□□□□□ -0.64
PTPRD-207ENST00000463477 MYH7BA7E2Y1 1941 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 ABCB11O95342 1321 aa11.05□□□□□ -0.64
PTPRD-207ENST00000463477 LOC102724159A0A0B4J2E5 919 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 SOWAHBA6NEL2 793 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 NFIBO00712 420 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 SEPT4O43236 478 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 OR52Z1P0C646 297 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 UBA7P41226 1012 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 NAPAP54920 295 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 TRAF1Q13077 416 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 BAATQ14032 418 aaPredicted RBP11.04□□□□□ -0.64
PTPRD-207ENST00000463477 PWP2Q15269 919 aaKnown RBP11.04□□□□□ -0.64
PTPRD-207ENST00000463477 INF2Q27J81 1249 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 COBLL1Q53SF7 1204 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 PRAMEF19Q5SWL8 479 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 RRAGBQ5VZM2 374 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 NSMFQ6X4W1 530 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 ANKRD20A12PQ8NF67 263 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 AMNQ9BXJ7 453 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 TMEM60Q9H2L4 133 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 MRPL11Q9Y3B7 192 aaKnown RBP11.04□□□□□ -0.64
PTPRD-207ENST00000463477 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTPRD-207ENST00000463477 PNMA6FA0A0J9YX94 578 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 SMCO2A6NFE2 343 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 ASB14A6NK59 587 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 RHOBTB3O94955 611 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 ZNF865P0CJ78 1059 aaPredicted RBP11.04□□□□□ -0.64
PTPRD-207ENST00000463477 TAL1P17542 331 aaPredicted RBP11.04□□□□□ -0.64
PTPRD-207ENST00000463477 CASP1P29466 404 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 CNGA1P29973 690 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 USH1GQ495M9 461 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 SYT10Q6XYQ8 523 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 RNF207Q6ZRF8 634 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 NEK8Q86SG6 692 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 PPFIBP1Q86W92 1011 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 MCF2L2Q86YR7 1114 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 CNGA4Q8IV77 575 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 ADSSL1Q8N142 457 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 SAMD3Q8N6K7 520 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 RASGRP4Q8TDF6 673 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 NOC3LQ8WTT2 800 aaKnown RBP11.04□□□□□ -0.64
PTPRD-207ENST00000463477 ABHD16BQ9H3Z7 469 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 ZNF215Q9UL58 517 aaPredicted RBP11.04□□□□□ -0.64
PTPRD-207ENST00000463477 CTNND2Q9UQB3 1225 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 PDE4DIPQ5VU43 2346 aa11.04□□□□□ -0.64
PTPRD-207ENST00000463477 KLRC4O43908 158 aa11.03□□□□□ -0.64
PTPRD-207ENST00000463477 RPS6P62753 249 aaKnown RBP11.03□□□□□ -0.64
PTPRD-207ENST00000463477 KARSQ15046 597 aaKnown RBP11.03□□□□□ -0.64
PTPRD-207ENST00000463477 KLHL10Q6JEL2 608 aa11.03□□□□□ -0.64
PTPRD-207ENST00000463477 HOMER1Q86YM7 354 aa11.03□□□□□ -0.64
PTPRD-207ENST00000463477 REXO1Q8N1G1 1221 aaKnown RBP11.03□□□□□ -0.64
PTPRD-207ENST00000463477 IGSF22Q8N9C0 903 aa11.03□□□□□ -0.64
PTPRD-207ENST00000463477 GIMAP8Q8ND71 665 aaPredicted RBP11.03□□□□□ -0.64
PTPRD-207ENST00000463477 DNERQ8NFT8 737 aa11.03□□□□□ -0.64
PTPRD-207ENST00000463477 MORC4Q8TE76 937 aa11.03□□□□□ -0.64
PTPRD-207ENST00000463477 NELFBQ8WX92 580 aa11.03□□□□□ -0.64
PTPRD-207ENST00000463477 PIGSQ96S52 555 aa11.03□□□□□ -0.64
PTPRD-207ENST00000463477 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
PTPRD-207ENST00000463477 MAP3K20Q9NYL2 800 aaKnown RBP11.03□□□□□ -0.64
PTPRD-207ENST00000463477 PCDHA1Q9Y5I3 950 aa11.03□□□□□ -0.64
PTPRD-207ENST00000463477 ASTN1O14525 1302 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 TEX33O43247 280 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 PPP1R11O60927 126 aaPredicted RBP11.02□□□□□ -0.64
PTPRD-207ENST00000463477 MFAP3LO75121 409 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 FARP2O94887 1054 aaPredicted RBP11.02□□□□□ -0.64
PTPRD-207ENST00000463477 TPM1P09493 284 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 EEF1GP26641 437 aaKnown RBP11.02□□□□□ -0.64
PTPRD-207ENST00000463477 MNX1P50219 401 aaPredicted RBP11.02□□□□□ -0.64
PTPRD-207ENST00000463477 COPB1P53618 953 aaKnown RBP11.02□□□□□ -0.64
PTPRD-207ENST00000463477 ADKP55263 362 aaKnown RBP11.02□□□□□ -0.64
PTPRD-207ENST00000463477 STX17P56962 302 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 GHRHRQ02643 423 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 STIM1Q13586 685 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 ACVR2BQ13705 512 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 KRT31Q15323 416 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 HSP90AA4PQ58FG1 418 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 TCP11X2Q5H9J9 407 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 ARMCX2Q7L311 632 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 SMYD4Q8IYR2 804 aaPredicted RBP11.02□□□□□ -0.64
PTPRD-207ENST00000463477 ZNF397Q8NF99 534 aaPredicted RBP11.02□□□□□ -0.64
PTPRD-207ENST00000463477 TBC1D5Q92609 795 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 CCDC47Q96A33 483 aaKnown RBP11.02□□□□□ -0.64
PTPRD-207ENST00000463477 DHTKD1Q96HY7 919 aaPredicted RBP11.02□□□□□ -0.64
PTPRD-207ENST00000463477 C7orf25Q9BPX7 421 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 BLZF1Q9H2G9 400 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 THAP9Q9H5L6 903 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 DNAI1Q9UI46 699 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms