RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 C6orf50Q9HD87 102 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 PPP4R2Q9NY27 417 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 SLC9A2Q9UBY0 812 aa13.58□□□□□ -0.24
RTCB-202ENST00000463455 NAP1L2Q9ULW6 460 aaPredicted RBP13.58□□□□□ -0.24
RTCB-202ENST00000463455 GSTTP1A0A1W2PQM5 241 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 RRN3P2A6NIE6 340 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 TREHO43280 583 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 EIF5BO60841 1220 aaKnown RBP13.57□□□□□ -0.24
RTCB-202ENST00000463455 CYP3A4P08684 503 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 CPA1P15085 419 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 THPOP40225 353 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 SLC26A2P50443 739 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 RABGGTBP53611 331 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 NTRK3Q16288 839 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 FAM26DQ5JW98 314 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 UTP14CQ5TAP6 766 aaKnown RBP13.57□□□□□ -0.24
RTCB-202ENST00000463455 FAM43BQ6ZT52 329 aaPredicted RBP13.57□□□□□ -0.24
RTCB-202ENST00000463455 TRIM50Q86XT4 487 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 LMBR1Q8WVP7 490 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 CRYGNQ8WXF5 182 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 PRDM12Q9H4Q4 367 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 SH3GLB2Q9NR46 395 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 SETD4Q9NVD3 440 aa13.57□□□□□ -0.24
RTCB-202ENST00000463455 MBLAC1A4D2B0 266 aaPredicted RBP13.56□□□□□ -0.24
RTCB-202ENST00000463455 CA3P07451 260 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 POU3F3P20264 500 aaPredicted RBP13.56□□□□□ -0.24
RTCB-202ENST00000463455 PDIA3P30101 505 aaKnown RBP13.56□□□□□ -0.24
RTCB-202ENST00000463455 ARHGAP4P98171 946 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 SETQ01105 290 aaPredicted RBP13.56□□□□□ -0.24
RTCB-202ENST00000463455 SP4Q02446 784 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 PPFIA1Q13136 1202 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 MBTPS1Q14703 1052 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 PKN1Q16512 942 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 PLEKHG4Q58EX7 1191 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 PLPPR4Q7Z2D5 763 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 RSPH3Q86UC2 560 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 REXO1Q8N1G1 1221 aaKnown RBP13.56□□□□□ -0.24
RTCB-202ENST00000463455 APBB2Q92870 758 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 GLG1Q92896 1179 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 ZNF274Q96GC6 653 aaPredicted RBP13.56□□□□□ -0.24
RTCB-202ENST00000463455 AZI2Q9H6S1 392 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 AGO4Q9HCK5 861 aaKnown RBP13.56□□□□□ -0.24
RTCB-202ENST00000463455 CYP46A1Q9Y6A2 500 aa13.56□□□□□ -0.24
RTCB-202ENST00000463455 TLL1O43897 1013 aa13.55□□□□□ -0.24
RTCB-202ENST00000463455 ATG7O95352 703 aa13.55□□□□□ -0.24
RTCB-202ENST00000463455 GJB5O95377 273 aa13.55□□□□□ -0.24
RTCB-202ENST00000463455 ZNF76P36508 570 aa13.55□□□□□ -0.24
RTCB-202ENST00000463455 TRIM22Q8IYM9 498 aa13.55□□□□□ -0.24
RTCB-202ENST00000463455 SEPT8Q92599 483 aa13.55□□□□□ -0.24
RTCB-202ENST00000463455 RAD9AQ99638 391 aa13.55□□□□□ -0.24
RTCB-202ENST00000463455 C22orf23Q9BZE7 217 aa13.55□□□□□ -0.24
RTCB-202ENST00000463455 TUBE1Q9UJT0 475 aa13.55□□□□□ -0.24
RTCB-202ENST00000463455 A0A0C4DFX4 3053 aa13.55□□□□□ -0.24
RTCB-202ENST00000463455 PTPRSQ13332 1948 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 MICAL3Q7RTP6 2002 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 DLL1O00548 723 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 AMHP03971 560 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 ARP10275 920 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 MYOGP15173 224 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 CIITAP33076 1130 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 ANAPC15P60006 121 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 ACTR2P61160 394 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 TOB2Q14106 344 aaPredicted RBP13.54□□□□□ -0.24
RTCB-202ENST00000463455 ADGRE1Q14246 886 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 GRIK4Q16099 956 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 CPLX2Q6PUV4 134 aaKnown RBP13.54□□□□□ -0.24
RTCB-202ENST00000463455 DBF4BQ8NFT6 615 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 CYP2W1Q8TAV3 490 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 TBC1D22BQ9NU19 505 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 TELO2Q9Y4R8 837 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 SQORQ9Y6N5 450 aa13.54□□□□□ -0.24
RTCB-202ENST00000463455 COL4A6Q14031 1691 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 IGLV3-22A0A075B6J6 115 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 IGKV6D-21A0A0A0MT36 114 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 FAM86B1E9PN63 330 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 FAM86B2P0C5J1 330 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 STAT5BP51692 787 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 DEFB103AP81534 67 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 TAP1Q03518 808 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 ITGB3BPQ13352 177 aaPredicted RBP13.53□□□□□ -0.24
RTCB-202ENST00000463455 JAKMIP3Q5VZ66 844 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 PLA2G4DQ86XP0 818 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 PHKBQ93100 1093 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 PGBD1Q96JS3 809 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 DCBLD2Q96PD2 775 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 PCYT2Q99447 389 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 ZBED2Q9BTP6 218 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 TMEM260Q9NX78 707 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 PKD2L1Q9P0L9 805 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 CHD7Q9P2D1 2997 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 INSL6Q9Y581 213 aa13.53□□□□□ -0.24
RTCB-202ENST00000463455 UNC80Q8N2C7 3258 aa13.52□□□□□ -0.24
RTCB-202ENST00000463455 IPO5O00410 1097 aaKnown RBP13.52□□□□□ -0.25
RTCB-202ENST00000463455 CPLX1O14810 134 aa13.52□□□□□ -0.25
RTCB-202ENST00000463455 DEXIO95424 95 aa13.52□□□□□ -0.25
RTCB-202ENST00000463455 MARK3P27448 753 aa13.52□□□□□ -0.25
RTCB-202ENST00000463455 MARCH8Q5T0T0 291 aa13.52□□□□□ -0.25
RTCB-202ENST00000463455 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.25
RTCB-202ENST00000463455 GALNT17Q6IS24 598 aa13.52□□□□□ -0.25
RTCB-202ENST00000463455 ZNF746Q6NUN9 644 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms