RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 HOXD11P31277 338 aaPredicted RBP22.69■■□□□ 1.22
VARS-221ENST00000463184 LIFRP42702 1097 aa22.69■■□□□ 1.22
VARS-221ENST00000463184 MTMR1Q13613 665 aa22.69■■□□□ 1.22
VARS-221ENST00000463184 EP400NLQ6ZTU2 488 aa22.69■■□□□ 1.22
VARS-221ENST00000463184 DNAJB3Q8WWF6 145 aa22.69■■□□□ 1.22
VARS-221ENST00000463184 ADGRA3Q8IWK6 1321 aa22.68■■□□□ 1.22
VARS-221ENST00000463184 SPDYE3A6NKU9 549 aa22.68■■□□□ 1.22
VARS-221ENST00000463184 LINC00271P0C7V0 271 aa22.68■■□□□ 1.22
VARS-221ENST00000463184 FBXO47Q5MNV8 452 aa22.68■■□□□ 1.22
VARS-221ENST00000463184 MARCH8Q5T0T0 291 aa22.68■■□□□ 1.22
VARS-221ENST00000463184 CMTR1Q8N1G2 835 aaKnown RBP22.68■■□□□ 1.22
VARS-221ENST00000463184 CLP1Q92989 425 aaKnown RBP22.68■■□□□ 1.22
VARS-221ENST00000463184 RC3H2Q9HBD1 1191 aaKnown RBP22.68■■□□□ 1.22
VARS-221ENST00000463184 JADE2Q9NQC1 790 aa22.68■■□□□ 1.22
VARS-221ENST00000463184 CLDND1Q9NY35 253 aa22.68■■□□□ 1.22
VARS-221ENST00000463184 PRKAG3Q9UGI9 489 aa22.68■■□□□ 1.22
VARS-221ENST00000463184 RRN3P2A6NIE6 340 aa22.67■■□□□ 1.22
VARS-221ENST00000463184 TSHZ1Q6ZSZ6 1077 aa22.67■■□□□ 1.22
VARS-221ENST00000463184 TNPO1Q92973 898 aaKnown RBP22.67■■□□□ 1.22
VARS-221ENST00000463184 ZNF689Q96CS4 500 aaPredicted RBP22.67■■□□□ 1.22
VARS-221ENST00000463184 PCDHA6Q9UN73 950 aa22.67■■□□□ 1.22
VARS-221ENST00000463184 PCDHA8Q9Y5H6 950 aa22.67■■□□□ 1.22
VARS-221ENST00000463184 SLC12A7Q9Y666 1083 aa22.67■■□□□ 1.22
VARS-221ENST00000463184 CDY2AQ9Y6F7 541 aa22.67■■□□□ 1.22
VARS-221ENST00000463184 SQORQ9Y6N5 450 aa22.67■■□□□ 1.22
VARS-221ENST00000463184 RXRAP19793 462 aa22.66■■□□□ 1.22
VARS-221ENST00000463184 BTG3Q14201 252 aaPredicted RBP22.66■■□□□ 1.22
VARS-221ENST00000463184 UBE2SQ16763 222 aa22.66■■□□□ 1.22
VARS-221ENST00000463184 IER5Q5VY09 327 aa22.66■■□□□ 1.22
VARS-221ENST00000463184 PLVAPQ9BX97 442 aa22.66■■□□□ 1.22
VARS-221ENST00000463184 PKD2L1Q9P0L9 805 aa22.66■■□□□ 1.22
VARS-221ENST00000463184 GRM6O15303 877 aa22.65■■□□□ 1.22
VARS-221ENST00000463184 INSRRP14616 1297 aa22.65■■□□□ 1.22
VARS-221ENST00000463184 IGBP1P78318 339 aa22.65■■□□□ 1.22
VARS-221ENST00000463184 MRPS6P82932 125 aaKnown RBP22.65■■□□□ 1.22
VARS-221ENST00000463184 CTC1Q2NKJ3 1217 aa22.65■■□□□ 1.22
VARS-221ENST00000463184 FANCBQ8NB91 859 aa22.65■■□□□ 1.22
VARS-221ENST00000463184 FTHL17Q9BXU8 183 aa22.65■■□□□ 1.22
VARS-221ENST00000463184 AZI2Q9H6S1 392 aa22.65■■□□□ 1.22
VARS-221ENST00000463184 JPH1Q9HDC5 661 aaPredicted RBP22.65■■□□□ 1.22
VARS-221ENST00000463184 SLC9A2Q9UBY0 812 aa22.65■■□□□ 1.22
VARS-221ENST00000463184 TTC3P53804 2025 aa22.64■■□□□ 1.22
VARS-221ENST00000463184 DGKIO75912 1065 aa22.64■■□□□ 1.21
VARS-221ENST00000463184 LTBRP36941 435 aa22.64■■□□□ 1.21
VARS-221ENST00000463184 ZP2Q05996 745 aa22.64■■□□□ 1.21
VARS-221ENST00000463184 TMTC3Q6ZXV5 915 aa22.64■■□□□ 1.21
VARS-221ENST00000463184 CCDC82Q8N4S0 544 aa22.64■■□□□ 1.21
VARS-221ENST00000463184 PCYT2Q99447 389 aa22.64■■□□□ 1.21
VARS-221ENST00000463184 LSG1Q9H089 658 aaKnown RBP22.64■■□□□ 1.21
VARS-221ENST00000463184 AGO3Q9H9G7 860 aaKnown RBP22.64■■□□□ 1.21
VARS-221ENST00000463184 MYO7AQ13402 2215 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 hCG_1642624A0A1W2PR95 340 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 POTEB3A0JP26 581 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 C19orf67A6NJJ6 358 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 M0QZ92 97 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 SLC27A2O14975 620 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 DCXO43602 365 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 POTEBQ6S5H4 581 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 HEATR3Q7Z4Q2 680 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 TEX2Q8IWB9 1127 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 ADHFE1Q8IWW8 467 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 MXRA8Q9BRK3 442 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 KCNH7Q9NS40 1196 aa22.63■■□□□ 1.21
VARS-221ENST00000463184 CD52P31358 61 aa22.62■■□□□ 1.21
VARS-221ENST00000463184 HYAL1Q12794 435 aa22.62■■□□□ 1.21
VARS-221ENST00000463184 CSPP1Q1MSJ5 1256 aa22.62■■□□□ 1.21
VARS-221ENST00000463184 NAALADL2Q58DX5 795 aa22.62■■□□□ 1.21
VARS-221ENST00000463184 PLPPR4Q7Z2D5 763 aa22.62■■□□□ 1.21
VARS-221ENST00000463184 SGMS1Q86VZ5 419 aa22.62■■□□□ 1.21
VARS-221ENST00000463184 P2RX5Q93086 422 aa22.62■■□□□ 1.21
VARS-221ENST00000463184 FAM49AQ9H0Q0 323 aaPredicted RBP22.62■■□□□ 1.21
VARS-221ENST00000463184 PCDHA2Q9Y5H9 948 aa22.62■■□□□ 1.21
VARS-221ENST00000463184 TRPV2Q9Y5S1 764 aa22.62■■□□□ 1.21
VARS-221ENST00000463184 NFASCO94856 1347 aa22.61■■□□□ 1.21
VARS-221ENST00000463184 MMP1P03956 469 aa22.61■■□□□ 1.21
VARS-221ENST00000463184 COL9A3Q14050 684 aaPredicted RBP22.61■■□□□ 1.21
VARS-221ENST00000463184 NECTIN1Q15223 517 aa22.61■■□□□ 1.21
VARS-221ENST00000463184 CREB3L3Q68CJ9 461 aa22.61■■□□□ 1.21
VARS-221ENST00000463184 SYNE3Q6ZMZ3 975 aa22.61■■□□□ 1.21
VARS-221ENST00000463184 RTN4RL1Q86UN2 441 aaPredicted RBP22.61■■□□□ 1.21
VARS-221ENST00000463184 RAB11FIP4Q86YS3 637 aa22.61■■□□□ 1.21
VARS-221ENST00000463184 CMTR2Q8IYT2 770 aaKnown RBP22.61■■□□□ 1.21
VARS-221ENST00000463184 CRIPAKQ8N1N5 446 aa22.61■■□□□ 1.21
VARS-221ENST00000463184 LINC01599Q8WXQ3 324 aa22.61■■□□□ 1.21
VARS-221ENST00000463184 SDF4Q9BRK5 362 aa22.61■■□□□ 1.21
VARS-221ENST00000463184 UPF3BQ9BZI7 483 aaKnown RBP22.61■■□□□ 1.21
VARS-221ENST00000463184 PLAGL2Q9UPG8 496 aa22.61■■□□□ 1.21
VARS-221ENST00000463184 TRPC6Q9Y210 931 aa22.61■■□□□ 1.21
VARS-221ENST00000463184 STAG3L1P0CL83 205 aa22.6■■□□□ 1.21
VARS-221ENST00000463184 STAT5BP51692 787 aa22.6■■□□□ 1.21
VARS-221ENST00000463184 ACTR2P61160 394 aa22.6■■□□□ 1.21
VARS-221ENST00000463184 PLCB4Q15147 1175 aa22.6■■□□□ 1.21
VARS-221ENST00000463184 SMAD2Q15796 467 aaKnown RBP22.6■■□□□ 1.21
VARS-221ENST00000463184 MICU3Q86XE3 530 aa22.6■■□□□ 1.21
VARS-221ENST00000463184 NPAS4Q8IUM7 802 aa22.6■■□□□ 1.21
VARS-221ENST00000463184 NME8Q8N427 588 aa22.6■■□□□ 1.21
VARS-221ENST00000463184 ZBTB10Q96DT7 871 aa22.6■■□□□ 1.21
VARS-221ENST00000463184 LRRC2Q9BYS8 371 aa22.6■■□□□ 1.21
VARS-221ENST00000463184 PADI3Q9ULW8 664 aa22.6■■□□□ 1.21
VARS-221ENST00000463184 FOSP01100 380 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms