RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 PDE4BQ07343 736 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 NMIQ13287 307 aaPredicted RBP8.18□□□□□ -1.1
NUP50-212ENST00000461194 IKBKEQ14164 716 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 ALX1Q15699 326 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 SLC9C1Q4G0N8 1177 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 KIAA1755Q5JYT7 1200 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 LBX2Q6XYB7 198 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 NBPF11Q86T75 865 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 ZNF589Q86UQ0 364 aaPredicted RBP8.18□□□□□ -1.1
NUP50-212ENST00000461194 CLEC10AQ8IUN9 316 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 ZNF444Q8N0Y2 327 aaPredicted RBP8.18□□□□□ -1.1
NUP50-212ENST00000461194 STK11IPQ8N1F8 1099 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 GPRC5AQ8NFJ5 357 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 RAET1EQ8TD07 263 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 SLC7A3Q8WY07 619 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 COA7Q96BR5 231 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 ZNF333Q96JL9 665 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 RPAP3Q9H6T3 665 aaPredicted RBP8.18□□□□□ -1.1
NUP50-212ENST00000461194 C12orf49Q9H741 205 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 VCPKMTQ9H867 229 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 TXNRD2Q9NNW7 524 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 NOP53Q9NZM5 478 aaKnown RBP8.18□□□□□ -1.1
NUP50-212ENST00000461194 RBPJLQ9UBG7 517 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 PTPRFP10586 1907 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 MYH7P12883 1935 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 HTTP42858 3142 aa8.18□□□□□ -1.1
NUP50-212ENST00000461194 ATAD5Q96QE3 1844 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 IGKV6D-41A0A0C4DH26 115 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 HIP1O00291 1037 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 SOX1O00570 391 aaPredicted RBP8.17□□□□□ -1.1
NUP50-212ENST00000461194 DEAF1O75398 565 aaPredicted RBP8.17□□□□□ -1.1
NUP50-212ENST00000461194 PRDM1O75626 825 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 FGAP02671 866 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 HSPD1P10809 573 aaKnown RBP8.17□□□□□ -1.1
NUP50-212ENST00000461194 GSPT1P15170 499 aaKnown RBP8.17□□□□□ -1.1
NUP50-212ENST00000461194 FLT3LGP49771 235 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 ERVK-24P63145 666 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 PCDH1Q08174 1060 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 COG2Q14746 738 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 SETDB1Q15047 1291 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 PRRT3Q5FWE3 981 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 TTC22Q5TAA0 569 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 HGSNATQ68CP4 663 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 CLEC4MQ9H2X3 399 aaPredicted RBP8.17□□□□□ -1.1
NUP50-212ENST00000461194 DIAPH3Q9NSV4 1193 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 HOXC10Q9NYD6 342 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 NYAP2Q9P242 653 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 ANAPC4Q9UJX5 808 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 GABRQQ9UN88 632 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.17□□□□□ -1.1
NUP50-212ENST00000461194 RABGAP1Q9Y3P9 1069 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 CCDC171Q6TFL3 1326 aa8.17□□□□□ -1.1
NUP50-212ENST00000461194 H3BRJ5 948 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 FSCN2O14926 492 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 WDR46O15213 610 aaKnown RBP8.16□□□□□ -1.1
NUP50-212ENST00000461194 SORBS3O60504 671 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 PEX10O60683 326 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 CNMDO75829 334 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 ZMYM6O95789 1325 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 FGRP09769 529 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 USP17L7P0C7H9 530 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 TSPY3P0CV98 308 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 TSPY8P0CW00 308 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 ITPKAP23677 461 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 COL8A1P27658 744 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 GSTT1P30711 240 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 MAPK4P31152 587 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 GRK4P32298 578 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 TFAP4Q01664 338 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 ZNF423Q2M1K9 1284 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 CWC27Q6UX04 472 aaKnown RBP8.16□□□□□ -1.1
NUP50-212ENST00000461194 FBXO11Q86XK2 927 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 SPICE1Q8N0Z3 855 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 SH3TC2Q8TF17 1288 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 MKL1Q969V6 931 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 CEP95Q96GE4 821 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 PAGR1Q9BTK6 254 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 MTMR4Q9NYA4 1195 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 FAM8A1Q9UBU6 413 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 VTI1BQ9UEU0 232 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 GJD2Q9UKL4 321 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 SYNPO2Q9UMS6 1093 aa8.16□□□□□ -1.1
NUP50-212ENST00000461194 BAZ2AQ9UIF9 1905 aaKnown RBP8.15□□□□□ -1.1
NUP50-212ENST00000461194 PLIN4Q96Q06 1357 aa8.15□□□□□ -1.1
NUP50-212ENST00000461194 F5H6K3 240 aa8.15□□□□□ -1.1
NUP50-212ENST00000461194 ORC4O43929 436 aa8.15□□□□□ -1.1
NUP50-212ENST00000461194 FLOT1O75955 427 aa8.15□□□□□ -1.1
NUP50-212ENST00000461194 TTLL1O95922 423 aa8.15□□□□□ -1.1
NUP50-212ENST00000461194 ESRRAP11474 423 aaPredicted RBP8.15□□□□□ -1.1
NUP50-212ENST00000461194 XRCC5P13010 732 aaKnown RBP8.15□□□□□ -1.1
NUP50-212ENST00000461194 CCNA1P78396 465 aa8.15□□□□□ -1.1
NUP50-212ENST00000461194 KLRC3Q07444 240 aa8.15□□□□□ -1.1
NUP50-212ENST00000461194 FAM47AQ5JRC9 791 aa8.15□□□□□ -1.1
NUP50-212ENST00000461194 CCAR1Q8IX12 1150 aaKnown RBP8.15□□□□□ -1.1
NUP50-212ENST00000461194 FMR1NBQ8N0W7 255 aaPredicted RBP8.15□□□□□ -1.1
NUP50-212ENST00000461194 DTWD1Q8N5C7 304 aa8.15□□□□□ -1.1
NUP50-212ENST00000461194 MB21D1Q8N884 522 aa8.15□□□□□ -1.1
NUP50-212ENST00000461194 GALNT11Q8NCW6 608 aa8.15□□□□□ -1.1
NUP50-212ENST00000461194 SOCS4Q8WXH5 440 aa8.15□□□□□ -1.1
NUP50-212ENST00000461194 TANGO6Q9C0B7 1094 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms