RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 CCL23P55773 120 aa22.65■■□□□ 1.22
SNAPC3-204ENST00000461041 PTK7Q13308 1070 aa22.65■■□□□ 1.22
SNAPC3-204ENST00000461041 BFSP2Q13515 415 aa22.65■■□□□ 1.22
SNAPC3-204ENST00000461041 SWSAP1Q6NVH7 229 aa22.65■■□□□ 1.22
SNAPC3-204ENST00000461041 POTEDQ86YR6 584 aa22.65■■□□□ 1.22
SNAPC3-204ENST00000461041 AFAP1L1Q8TED9 768 aa22.65■■□□□ 1.22
SNAPC3-204ENST00000461041 DHX38Q92620 1227 aaKnown RBP22.65■■□□□ 1.22
SNAPC3-204ENST00000461041 FAM20AQ96MK3 541 aa22.65■■□□□ 1.22
SNAPC3-204ENST00000461041 ZNF302Q9NR11 478 aa22.65■■□□□ 1.22
SNAPC3-204ENST00000461041 SAMM50Q9Y512 469 aa22.65■■□□□ 1.22
SNAPC3-204ENST00000461041 A0A1W2PPC1 479 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 PITPNM1O00562 1244 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 TBX3O15119 743 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 TREHO43280 583 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 CHMP2AO43633 222 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 SLC26A2P50443 739 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 EPHB4P54760 987 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 PPFIA1Q13136 1202 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 PPIGQ13427 754 aaKnown RBP eCLIP22.64■■□□□ 1.218e-7■□□□□ 9.8
SNAPC3-204ENST00000461041 PLCB4Q15147 1175 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 HABP4Q5JVS0 413 aaKnown RBP22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 B3GNT9Q6UX72 402 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 SERINC5Q86VE9 423 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 NOSTRINQ8IVI9 506 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 CCDC155Q8N6L0 562 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 CAGE1Q8TC20 777 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 LMBR1Q8WVP7 490 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 HAS1Q92839 578 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 DISC1Q9NRI5 854 aa22.64■■□□□ 1.21
SNAPC3-204ENST00000461041 K7ELQ4 463 aaPredicted RBP22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 U2AF2P26368 475 aaKnown RBP eCLIP22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 SFNP31947 248 aa22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 JAK3P52333 1124 aa22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 ADAM17P78536 824 aa22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 GRIK4Q16099 956 aa22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 PDXDC2PQ6P474 469 aa22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 TDHQ8IZJ6 230 aa22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 RETREG2Q8NC44 543 aa22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 WNT8BQ93098 351 aa22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 SNX21Q969T3 373 aa22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 SCLYQ96I15 445 aa22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 TRPC6Q9Y210 931 aa22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 TRIP12Q14669 1992 aaPredicted RBP22.63■■□□□ 1.21
SNAPC3-204ENST00000461041 MARCH6O60337 910 aa22.62■■□□□ 1.21
SNAPC3-204ENST00000461041 INSRRP14616 1297 aa22.62■■□□□ 1.21
SNAPC3-204ENST00000461041 ATP2B1P20020 1258 aa22.62■■□□□ 1.21
SNAPC3-204ENST00000461041 RBL2Q08999 1139 aa22.62■■□□□ 1.21
SNAPC3-204ENST00000461041 TRIM71Q2Q1W2 868 aaKnown RBP22.62■■□□□ 1.21
SNAPC3-204ENST00000461041 MIER3Q7Z3K6 550 aa22.62■■□□□ 1.21
SNAPC3-204ENST00000461041 GABBR1Q9UBS5 961 aa22.62■■□□□ 1.21
SNAPC3-204ENST00000461041 MAFBQ9Y5Q3 323 aaPredicted RBP22.62■■□□□ 1.21
SNAPC3-204ENST00000461041 POTEB3A0JP26 581 aa22.61■■□□□ 1.21
SNAPC3-204ENST00000461041 H3BQV1 296 aa22.61■■□□□ 1.21
SNAPC3-204ENST00000461041 BAG4O95429 457 aaKnown RBP22.61■■□□□ 1.21
SNAPC3-204ENST00000461041 IQCF3P0C7M6 154 aa22.61■■□□□ 1.21
SNAPC3-204ENST00000461041 CKBP12277 381 aa22.61■■□□□ 1.21
SNAPC3-204ENST00000461041 ATP4AP20648 1035 aa22.61■■□□□ 1.21
SNAPC3-204ENST00000461041 POTEBQ6S5H4 581 aa22.61■■□□□ 1.21
SNAPC3-204ENST00000461041 RDM1Q8NG50 284 aa22.61■■□□□ 1.21
SNAPC3-204ENST00000461041 ATP8B4Q8TF62 1192 aa22.61■■□□□ 1.21
SNAPC3-204ENST00000461041 TNPO1Q92973 898 aaKnown RBP22.61■■□□□ 1.21
SNAPC3-204ENST00000461041 IL23AQ9NPF7 189 aa22.61■■□□□ 1.21
SNAPC3-204ENST00000461041 VAV3Q9UKW4 847 aa22.61■■□□□ 1.21
SNAPC3-204ENST00000461041 IGSF9BQ9UPX0 1349 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 TANC1Q9C0D5 1861 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 RRN3P2A6NIE6 340 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 NEMFO60524 1076 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 IGBP1P78318 339 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 PPP2R5CQ13362 524 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 SHHQ15465 462 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 CALCRLQ16602 461 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 C9orf50Q5SZB4 431 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 MARCH8Q5T0T0 291 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 LARP1BQ659C4 914 aaKnown RBP22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 MCTP1Q6DN14 999 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 C16orf59Q7L2K0 433 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 CKAP2LQ8IYA6 745 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 SLFN12Q8IYM2 578 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 TUBE1Q9UJT0 475 aa22.6■■□□□ 1.21
SNAPC3-204ENST00000461041 HBP1O60381 514 aa22.59■■□□□ 1.21
SNAPC3-204ENST00000461041 ACRP10323 421 aa22.59■■□□□ 1.21
SNAPC3-204ENST00000461041 SELPP16109 830 aa22.59■■□□□ 1.21
SNAPC3-204ENST00000461041 MCM7P33993 719 aa22.59■■□□□ 1.21
SNAPC3-204ENST00000461041 LRRC8DQ7L1W4 858 aa22.59■■□□□ 1.21
SNAPC3-204ENST00000461041 TRAPPC12Q8WVT3 735 aa22.59■■□□□ 1.21
SNAPC3-204ENST00000461041 INTS4Q96HW7 963 aaKnown RBP22.59■■□□□ 1.21
SNAPC3-204ENST00000461041 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.59■■□□□ 1.215e-8■□□□□ 8.8
SNAPC3-204ENST00000461041 NOL7Q9UMY1 257 aaKnown RBP22.59■■□□□ 1.21
SNAPC3-204ENST00000461041 MBLAC1A4D2B0 266 aaPredicted RBP22.58■■□□□ 1.21
SNAPC3-204ENST00000461041 EML1O00423 815 aa22.58■■□□□ 1.21
SNAPC3-204ENST00000461041 RFC2P35250 354 aa22.58■■□□□ 1.21
SNAPC3-204ENST00000461041 THPOP40225 353 aa22.58■■□□□ 1.21
SNAPC3-204ENST00000461041 TRAPPC10P48553 1259 aa22.58■■□□□ 1.21
SNAPC3-204ENST00000461041 UGCGQ16739 394 aa22.58■■□□□ 1.21
SNAPC3-204ENST00000461041 TTC38Q5R3I4 469 aa22.58■■□□□ 1.21
SNAPC3-204ENST00000461041 TMEM240Q5SV17 173 aa22.58■■□□□ 1.21
SNAPC3-204ENST00000461041 ZNF618Q5T7W0 954 aa22.58■■□□□ 1.21
SNAPC3-204ENST00000461041 BBXQ8WY36 941 aaPredicted RBP22.58■■□□□ 1.21
SNAPC3-204ENST00000461041 VWCEQ96DN2 955 aa22.58■■□□□ 1.21
SNAPC3-204ENST00000461041 KAT6AQ92794 2004 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms