RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 CES2O00748 559 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 CEP104O60308 925 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 USP11P51784 963 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 KCTD1Q719H9 257 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 ZNF571Q7Z3V5 609 aaPredicted RBP13.25□□□□□ -0.29
GCOM1-203ENST00000460962 ZC3H3Q8IXZ2 948 aaKnown RBP13.25□□□□□ -0.29
GCOM1-203ENST00000460962 PBKQ96KB5 322 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 GOLPH3Q9H4A6 298 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 USP17L15C9J2P7 530 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 USP17L13C9JLJ4 530 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 USP17L11C9JVI0 530 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 USP17L18D6R9N7 530 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 USP17L22D6RA61 530 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 USP17L17D6RBQ6 530 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 USP17L19D6RCP7 530 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 USP17L20D6RJB6 530 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 UCHL3P15374 230 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 SLC9A1P19634 815 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 HSPA9P38646 679 aaKnown RBP13.25□□□□□ -0.29
GCOM1-203ENST00000460962 GTF2A1P52655 376 aaPredicted RBP13.25□□□□□ -0.29
GCOM1-203ENST00000460962 USP17L24Q0WX57 530 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 USP17L6PQ6QN14 398 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.25□□□□□ -0.29
GCOM1-203ENST00000460962 ISCUQ9H1K1 167 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 EPN3Q9H201 632 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 CENPHQ9H3R5 247 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 SWAP70Q9UH65 585 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 TMEM59LQ9UK28 342 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 PITPNM2Q9BZ72 1349 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 POTEFA5A3E0 1075 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 MPHOSPH10O00566 681 aaKnown RBP13.24□□□□□ -0.29
GCOM1-203ENST00000460962 PPP1R37O75864 691 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 STAT3P40763 770 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 PTPROQ16827 1216 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 EXOC3L4Q17RC7 722 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 POTEGQ6S5H5 508 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 POTEEQ6S8J3 1075 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 IRF2BP2Q7Z5L9 587 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 SPATS2Q86XZ4 545 aaKnown RBP13.24□□□□□ -0.29
GCOM1-203ENST00000460962 SERPINB13Q9UIV8 391 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 MYH4Q9Y623 1939 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 MED24O75448 989 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 AFPP02771 609 aaKnown RBP13.24□□□□□ -0.29
GCOM1-203ENST00000460962 ERVK-9P63128 1117 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 CUL1Q13616 776 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 TRAPPC3LQ5T215 181 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 ALKBH5Q6P6C2 394 aaKnown RBP13.24□□□□□ -0.29
GCOM1-203ENST00000460962 MMS22LQ6ZRQ5 1243 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 FRMD5Q7Z6J6 570 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 DHX36Q9H2U1 1008 aaKnown RBP13.24□□□□□ -0.29
GCOM1-203ENST00000460962 PLCB1Q9NQ66 1216 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
GCOM1-203ENST00000460962 FRMD3A2A2Y4 597 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 TMCO5BA8MYB1 307 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 RAD21O60216 631 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 FLOT1O75955 427 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 MYBP10242 640 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 XRCC5P13010 732 aaKnown RBP13.24□□□□□ -0.29
GCOM1-203ENST00000460962 CASP5P51878 434 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 SLC12A3P55017 1021 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 ARSHQ5FYA8 562 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 DCAF17Q5H9S7 520 aaPredicted RBP13.24□□□□□ -0.29
GCOM1-203ENST00000460962 EMC10Q5UCC4 262 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 OTUD6BQ8N6M0 293 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 C1orf131Q8NDD1 294 aaKnown RBP13.24□□□□□ -0.29
GCOM1-203ENST00000460962 ACTRT1Q8TDG2 376 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 KCNMB3Q9NPA1 279 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 NAGPAQ9UK23 515 aa13.24□□□□□ -0.29
GCOM1-203ENST00000460962 F8W031 263 aaPredicted RBP13.23□□□□□ -0.29
GCOM1-203ENST00000460962 PGRMC1O00264 195 aaKnown RBP13.23□□□□□ -0.29
GCOM1-203ENST00000460962 HPDP32754 393 aaPredicted RBP13.23□□□□□ -0.29
GCOM1-203ENST00000460962 GTF2IP78347 998 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 TCERG1LQ5VWI1 586 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 NAA35Q5VZE5 725 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 MICALCLQ6ZW33 695 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 SLFN12Q8IYM2 578 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 EIF1ADQ8N9N8 165 aaKnown RBP13.23□□□□□ -0.29
GCOM1-203ENST00000460962 KAT2BQ92831 832 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 LRRC45Q96CN5 670 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 AP1M1Q9BXS5 423 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 GLT8D2Q9H1C3 349 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 ATAD5Q96QE3 1844 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 C6orf229H3BNL8 230 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 GCOM1H8Y6P7 765 aaPredicted RBP13.23□□□□□ -0.29
GCOM1-203ENST00000460962 SLC26A4O43511 780 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 MYZAPP0CAP1 466 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 MDH1P40925 334 aaKnown RBP13.23□□□□□ -0.29
GCOM1-203ENST00000460962 PTGISQ16647 500 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 KNOP1Q1ED39 458 aaKnown RBP13.23□□□□□ -0.29
GCOM1-203ENST00000460962 PRR5LQ6MZQ0 368 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 VPS36Q86VN1 386 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 DNAAF5Q86Y56 855 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 SCFD2Q8WU76 684 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 ANO3Q9BYT9 981 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 TRAF3IP3Q9Y228 551 aa13.23□□□□□ -0.29
GCOM1-203ENST00000460962 ATXN2Q99700 1313 aaKnown RBP13.23□□□□□ -0.29
GCOM1-203ENST00000460962 PON1P27169 355 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 HSD17B3P37058 310 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms