RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 NRIP1P48552 1158 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 MRPS9P82933 396 aaKnown RBP13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 NMIQ13287 307 aaPredicted RBP13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 SLC35G1Q2M3R5 365 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 CCDC178Q5BJE1 867 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 METTL7BQ6UX53 244 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 RUFY4Q6ZNE9 571 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 CYFIP1Q7L576 1253 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 IQCA1Q86XH1 822 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 SAMD3Q8N6K7 520 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 LINC01599Q8WXQ3 324 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 PPP2R3CQ969Q6 453 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 PHF12Q96QT6 1004 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 PHF7Q9BWX1 381 aaPredicted RBP13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 PCDHGC5Q9Y5F6 944 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 PCDHA1Q9Y5I3 950 aa13.49□□□□□ -0.25
PCYT1A-213ENST00000460827 NRCAMQ92823 1304 aa13.48□□□□□ -0.25
PCYT1A-213ENST00000460827 PROB1E7EW31 1015 aa13.48□□□□□ -0.25
PCYT1A-213ENST00000460827 NAALADL2Q58DX5 795 aa13.48□□□□□ -0.25
PCYT1A-213ENST00000460827 FBXO47Q5MNV8 452 aa13.48□□□□□ -0.25
PCYT1A-213ENST00000460827 RTN4RL1Q86UN2 441 aaPredicted RBP13.48□□□□□ -0.25
PCYT1A-213ENST00000460827 TICAM2Q86XR7 235 aa13.48□□□□□ -0.25
PCYT1A-213ENST00000460827 KLHL23Q8NBE8 558 aa13.48□□□□□ -0.25
PCYT1A-213ENST00000460827 SUSD6Q92537 303 aa13.48□□□□□ -0.25
PCYT1A-213ENST00000460827 INPP4AQ96PE3 977 aaPredicted RBP13.48□□□□□ -0.25
PCYT1A-213ENST00000460827 ZSCAN10Q96SZ4 725 aaPredicted RBP13.48□□□□□ -0.25
PCYT1A-213ENST00000460827 FRMPD4Q14CM0 1322 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 TRIM6-TRIM34B2RNG4 842 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 SPATA31C2B4DYI2 1134 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 B4E1Z4 1266 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 KLRF2D3W0D1 207 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 ZBTB5O15062 677 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 NT5C2P49902 561 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 RBM10P98175 930 aaKnown RBP13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 NEDD9Q14511 834 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 RBM23Q86U06 439 aaKnown RBP13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 FCHSD1Q86WN1 690 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 CMTR2Q8IYT2 770 aaKnown RBP13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 POF1BQ8WVV4 589 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 ATOH1Q92858 354 aaPredicted RBP13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 RPGRIP1Q96KN7 1286 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 IRF2BPLQ9H1B7 796 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 AGO3Q9H9G7 860 aaKnown RBP13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 ZSWIM5Q9P217 1185 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 SPTBN2O15020 2390 aa13.47□□□□□ -0.25
PCYT1A-213ENST00000460827 H0Y858 1186 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 GCOM1H8Y6P7 765 aaPredicted RBP13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 ZNF213O14771 459 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 PDGFBP01127 241 aaPredicted RBP13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 POLR2MP0CAP2 368 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 ATF7P17544 494 aaPredicted RBP13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 PDE1AP54750 535 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 PTPN21Q16825 1174 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 GNPTABQ3T906 1256 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 UTP14CQ5TAP6 766 aaKnown RBP13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 TAF2Q6P1X5 1199 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 TSHZ1Q6ZSZ6 1077 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 ASCL5Q7RTU5 278 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 VN1R2Q8NFZ6 395 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 ATP8B4Q8TF62 1192 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 TLR9Q9NR96 1032 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 MAD2L2Q9UI95 211 aa13.46□□□□□ -0.25
PCYT1A-213ENST00000460827 FNDC1Q4ZHG4 1894 aaPredicted RBP13.46□□□□□ -0.26
PCYT1A-213ENST00000460827 MBLAC1A4D2B0 266 aaPredicted RBP13.45□□□□□ -0.26
PCYT1A-213ENST00000460827 VASPP50552 380 aaPredicted RBP13.45□□□□□ -0.26
PCYT1A-213ENST00000460827 PAN2Q504Q3 1202 aaKnown RBP13.45□□□□□ -0.26
PCYT1A-213ENST00000460827 MARCH8Q5T0T0 291 aa13.45□□□□□ -0.26
PCYT1A-213ENST00000460827 TLE6Q9H808 572 aa13.45□□□□□ -0.26
PCYT1A-213ENST00000460827 CDY2AQ9Y6F7 541 aa13.45□□□□□ -0.26
PCYT1A-213ENST00000460827 ACACBO00763 2458 aa13.45□□□□□ -0.26
PCYT1A-213ENST00000460827 PALM3A6NDB9 673 aaPredicted RBP13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 PER2O15055 1255 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 FIBPO43427 364 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 STAM2O75886 525 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 CD52P31358 61 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 GATMP50440 423 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 NUBP1P53384 320 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 SP4Q02446 784 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 PPFIA1Q13136 1202 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 NPAS4Q8IUM7 802 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 DNAJB3Q8WWF6 145 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 SENP7Q9BQF6 1050 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 RTEL1Q9NZ71 1219 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 TUBE1Q9UJT0 475 aa13.44□□□□□ -0.26
PCYT1A-213ENST00000460827 PRR23AA6NEV1 266 aa13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 MRPS6P82932 125 aaKnown RBP13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 SEC23AQ15436 765 aa13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 GRIK4Q16099 956 aa13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 OTOGLQ3ZCN5 2332 aa13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 ANKRD45Q5TZF3 282 aa13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 RSPH3Q86UC2 560 aa13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 HOMER1Q86YM7 354 aa13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 ZBTB10Q96DT7 871 aa13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 RIPOR3Q96MK2 946 aa13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 PIGSQ96S52 555 aa13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 S1PR5Q9H228 398 aa13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 RIOX1Q9H6W3 641 aa13.43□□□□□ -0.26
PCYT1A-213ENST00000460827 KMT2BQ9UMN6 2715 aaPredicted RBP13.42□□□□□ -0.26
PCYT1A-213ENST00000460827 CYTH3O43739 400 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms