RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 UNC45AQ9H3U1 944 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 DISC1Q9NRI5 854 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 TMEM39AQ9NV64 488 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 SAMM50Q9Y512 469 aa25.31■■□□□ 1.64
C9orf3-209ENST00000460573 PSMC6P62333 389 aa25.3■■□□□ 1.64
C9orf3-209ENST00000460573 NBR1Q14596 966 aa25.3■■□□□ 1.64
C9orf3-209ENST00000460573 MFSD10Q14728 455 aa25.3■■□□□ 1.64
C9orf3-209ENST00000460573 MIER3Q7Z3K6 550 aa25.3■■□□□ 1.64
C9orf3-209ENST00000460573 AFAP1L1Q8TED9 768 aa25.3■■□□□ 1.64
C9orf3-209ENST00000460573 GLG1Q92896 1179 aa25.3■■□□□ 1.64
C9orf3-209ENST00000460573 TOX2Q96NM4 488 aa25.3■■□□□ 1.64
C9orf3-209ENST00000460573 TMEM60Q9H2L4 133 aa25.3■■□□□ 1.64
C9orf3-209ENST00000460573 TTC12Q9H892 705 aaPredicted RBP25.3■■□□□ 1.64
C9orf3-209ENST00000460573 ERAP1Q9NZ08 941 aa25.3■■□□□ 1.64
C9orf3-209ENST00000460573 VAV3Q9UKW4 847 aa25.3■■□□□ 1.64
C9orf3-209ENST00000460573 CEP131Q9UPN4 1083 aa25.3■■□□□ 1.64
C9orf3-209ENST00000460573 RANBP2P49792 3224 aaKnown RBP25.29■■□□□ 1.64
C9orf3-209ENST00000460573 BACH1O14867 736 aa25.29■■□□□ 1.64
C9orf3-209ENST00000460573 TXKP42681 527 aa25.29■■□□□ 1.64
C9orf3-209ENST00000460573 CDK7P50613 346 aa25.29■■□□□ 1.64
C9orf3-209ENST00000460573 STAT5BP51692 787 aa25.29■■□□□ 1.64
C9orf3-209ENST00000460573 PTGDRQ13258 359 aa25.29■■□□□ 1.64
C9orf3-209ENST00000460573 KIAA0753Q2KHM9 967 aa25.29■■□□□ 1.64
C9orf3-209ENST00000460573 NBPF20Q3BBV1 942 aa25.29■■□□□ 1.64
C9orf3-209ENST00000460573 C4orf32Q8N8J7 132 aa25.29■■□□□ 1.64
C9orf3-209ENST00000460573 TNPO1Q92973 898 aaKnown RBP25.29■■□□□ 1.64
C9orf3-209ENST00000460573 ZNF302Q9NR11 478 aa25.29■■□□□ 1.64
C9orf3-209ENST00000460573 SCN10AQ9Y5Y9 1956 aa25.28■■□□□ 1.64
C9orf3-209ENST00000460573 CHMP2AO43633 222 aa25.28■■□□□ 1.64
C9orf3-209ENST00000460573 F13A1P00488 732 aa25.28■■□□□ 1.64
C9orf3-209ENST00000460573 PRPHP41219 470 aa25.28■■□□□ 1.64
C9orf3-209ENST00000460573 TMEM266Q2M3C6 531 aa25.28■■□□□ 1.64
C9orf3-209ENST00000460573 SWSAP1Q6NVH7 229 aa25.28■■□□□ 1.64
C9orf3-209ENST00000460573 ANKRD33Q7Z3H0 272 aa25.28■■□□□ 1.64
C9orf3-209ENST00000460573 SH3RF1Q7Z6J0 888 aa25.28■■□□□ 1.64
C9orf3-209ENST00000460573 SESTD1Q86VW0 696 aa25.28■■□□□ 1.64
C9orf3-209ENST00000460573 DEFB123Q8N688 67 aa25.28■■□□□ 1.64
C9orf3-209ENST00000460573 PCYT2Q99447 389 aa25.28■■□□□ 1.64
C9orf3-209ENST00000460573 GRIN2DO15399 1336 aa25.28■■□□□ 1.64
C9orf3-209ENST00000460573 TLR3O15455 904 aaKnown RBP25.27■■□□□ 1.64
C9orf3-209ENST00000460573 GPR153Q6NV75 609 aa25.27■■□□□ 1.64
C9orf3-209ENST00000460573 TRIM50Q86XT4 487 aa25.27■■□□□ 1.64
C9orf3-209ENST00000460573 C7orf31Q8N865 590 aa25.27■■□□□ 1.64
C9orf3-209ENST00000460573 TRIM43BA6NCK2 446 aa25.26■■□□□ 1.63
C9orf3-209ENST00000460573 BRD1O95696 1058 aa25.26■■□□□ 1.63
C9orf3-209ENST00000460573 ATP2C1P98194 919 aaPredicted RBP25.26■■□□□ 1.63
C9orf3-209ENST00000460573 SPIRE1Q08AE8 756 aa25.26■■□□□ 1.63
C9orf3-209ENST00000460573 EPHA7Q15375 998 aa25.26■■□□□ 1.63
C9orf3-209ENST00000460573 ARL6IP4Q66PJ3 421 aaKnown RBP25.26■■□□□ 1.63
C9orf3-209ENST00000460573 CCDC60Q8IWA6 550 aaPredicted RBP25.26■■□□□ 1.63
C9orf3-209ENST00000460573 TRIM43Q96BQ3 446 aaPredicted RBP25.26■■□□□ 1.63
C9orf3-209ENST00000460573 MAFBQ9Y5Q3 323 aaPredicted RBP25.26■■□□□ 1.63
C9orf3-209ENST00000460573 DNAH12Q6ZR08 3092 aa25.26■■□□□ 1.63
C9orf3-209ENST00000460573 DKC1O60832 514 aaKnown RBP eCLIP25.25■■□□□ 1.633e-6■■□□□ 13.1
C9orf3-209ENST00000460573 FXR2P51116 673 aaKnown RBP eCLIP25.25■■□□□ 1.63
C9orf3-209ENST00000460573 CHMP4BP1P59074 171 aa25.25■■□□□ 1.63
C9orf3-209ENST00000460573 PKP1Q13835 747 aa25.25■■□□□ 1.63
C9orf3-209ENST00000460573 PDIA5Q14554 519 aa25.25■■□□□ 1.63
C9orf3-209ENST00000460573 PDXDC2PQ6P474 469 aa25.25■■□□□ 1.63
C9orf3-209ENST00000460573 ATP6V0A1Q93050 837 aa25.25■■□□□ 1.63
C9orf3-209ENST00000460573 ZNF396Q96N95 335 aaPredicted RBP25.25■■□□□ 1.63
C9orf3-209ENST00000460573 RAB34Q9BZG1 259 aa25.25■■□□□ 1.63
C9orf3-209ENST00000460573 GABBR1Q9UBS5 961 aa25.25■■□□□ 1.63
C9orf3-209ENST00000460573 SF3A1Q15459 793 aaKnown RBP25.24■■□□□ 1.63
C9orf3-209ENST00000460573 FAM47CQ5HY64 1035 aa25.24■■□□□ 1.63
C9orf3-209ENST00000460573 ATL3Q6DD88 541 aa25.24■■□□□ 1.63
C9orf3-209ENST00000460573 NCAPH2Q6IBW4 605 aa25.24■■□□□ 1.63
C9orf3-209ENST00000460573 DTHD1Q6ZMT9 781 aa25.24■■□□□ 1.63
C9orf3-209ENST00000460573 RNPEPQ9H4A4 650 aa25.24■■□□□ 1.63
C9orf3-209ENST00000460573 GTF2IRD1Q9UHL9 959 aa25.24■■□□□ 1.63
C9orf3-209ENST00000460573 STK24Q9Y6E0 443 aa25.24■■□□□ 1.63
C9orf3-209ENST00000460573 IGSF9BQ9UPX0 1349 aa25.23■■□□□ 1.63
C9orf3-209ENST00000460573 EML1O00423 815 aa25.23■■□□□ 1.63
C9orf3-209ENST00000460573 P4HBP07237 508 aaKnown RBP25.23■■□□□ 1.63
C9orf3-209ENST00000460573 GNAT1P11488 350 aa25.23■■□□□ 1.63
C9orf3-209ENST00000460573 TECP42680 631 aa25.23■■□□□ 1.63
C9orf3-209ENST00000460573 NUCB2P80303 420 aa25.23■■□□□ 1.63
C9orf3-209ENST00000460573 FPGSQ05932 587 aa25.23■■□□□ 1.63
C9orf3-209ENST00000460573 FAM173BQ6P4H8 233 aa25.23■■□□□ 1.63
C9orf3-209ENST00000460573 FAM126BQ8IXS8 530 aa25.23■■□□□ 1.63
C9orf3-209ENST00000460573 NEK9Q8TD19 979 aa25.23■■□□□ 1.63
C9orf3-209ENST00000460573 FAM167AQ96KS9 214 aa25.23■■□□□ 1.63
C9orf3-209ENST00000460573 HDAC6Q9UBN7 1215 aa25.23■■□□□ 1.63
C9orf3-209ENST00000460573 RBM19Q9Y4C8 960 aaKnown RBP25.23■■□□□ 1.63
C9orf3-209ENST00000460573 ATP6V1DQ9Y5K8 247 aa25.23■■□□□ 1.63
C9orf3-209ENST00000460573 NRCAMQ92823 1304 aa25.22■■□□□ 1.63
C9orf3-209ENST00000460573 POTEB3A0JP26 581 aa25.22■■□□□ 1.63
C9orf3-209ENST00000460573 KIAA0355O15063 1070 aa25.22■■□□□ 1.63
C9orf3-209ENST00000460573 SMIM10L2AP0DMW4 78 aa25.22■■□□□ 1.63
C9orf3-209ENST00000460573 SMIM10L2BP0DMW5 78 aa25.22■■□□□ 1.63
C9orf3-209ENST00000460573 PSMC5P62195 406 aa25.22■■□□□ 1.63
C9orf3-209ENST00000460573 PLCB4Q15147 1175 aa25.22■■□□□ 1.63
C9orf3-209ENST00000460573 SHHQ15465 462 aa25.22■■□□□ 1.63
C9orf3-209ENST00000460573 FOXD4L5Q5VV16 416 aaPredicted RBP25.22■■□□□ 1.63
C9orf3-209ENST00000460573 POTEBQ6S5H4 581 aa25.22■■□□□ 1.63
C9orf3-209ENST00000460573 Q7L0L9 218 aa25.22■■□□□ 1.63
C9orf3-209ENST00000460573 ERMNQ8TAM6 284 aa25.22■■□□□ 1.63
C9orf3-209ENST00000460573 ATP8B4Q8TF62 1192 aa25.22■■□□□ 1.63
C9orf3-209ENST00000460573 FOXD4L4Q8WXT5 416 aaPredicted RBP25.22■■□□□ 1.63
C9orf3-209ENST00000460573 BBXQ8WY36 941 aaPredicted RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms