RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 MIB1Q86YT6 1006 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 PASD1Q8IV76 773 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 TTLL11Q8NHH1 800 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 SMARCC2Q8TAQ2 1214 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 SYT3Q9BQG1 590 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 RBPJLQ9UBG7 517 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 NOP58Q9Y2X3 529 aaKnown RBP6.58□□□□□ -1.36
VBP1-202ENST00000460509 PCDHA5Q9Y5H7 936 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 B3GALT1Q9Y5Z6 326 aa6.58□□□□□ -1.36
VBP1-202ENST00000460509 ETV2O00321 342 aaPredicted RBP6.57□□□□□ -1.36
VBP1-202ENST00000460509 DVL2O14641 736 aa6.57□□□□□ -1.36
VBP1-202ENST00000460509 N4BP3O15049 544 aa6.57□□□□□ -1.36
VBP1-202ENST00000460509 PPM1GO15355 546 aaPredicted RBP6.57□□□□□ -1.36
VBP1-202ENST00000460509 C4BPAP04003 597 aaKnown RBP6.57□□□□□ -1.36
VBP1-202ENST00000460509 CYP2C8P10632 490 aa6.57□□□□□ -1.36
VBP1-202ENST00000460509 YBX3P16989 372 aaKnown RBP eCLIP6.57□□□□□ -1.361e-6■□□□□ 9.5
VBP1-202ENST00000460509 LIMS1P48059 325 aa6.57□□□□□ -1.36
VBP1-202ENST00000460509 DLG4P78352 724 aa6.57□□□□□ -1.36
VBP1-202ENST00000460509 FAM50AQ14320 339 aaKnown RBP6.57□□□□□ -1.36
VBP1-202ENST00000460509 CR1LQ2VPA4 569 aa6.57□□□□□ -1.36
VBP1-202ENST00000460509 ATP13A4Q4VNC1 1196 aa6.57□□□□□ -1.36
VBP1-202ENST00000460509 HIPK4Q8NE63 616 aa6.57□□□□□ -1.36
VBP1-202ENST00000460509 WDR66Q8TBY9 1149 aa6.57□□□□□ -1.36
VBP1-202ENST00000460509 ELF4Q99607 663 aaPredicted RBP6.57□□□□□ -1.36
VBP1-202ENST00000460509 RNF38Q9H0F5 515 aa6.57□□□□□ -1.36
VBP1-202ENST00000460509 NGRNQ9NPE2 291 aaKnown RBP6.57□□□□□ -1.36
VBP1-202ENST00000460509 ARHGAP28Q9P2N2 729 aa6.57□□□□□ -1.36
VBP1-202ENST00000460509 FOXP2O15409 715 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 ZEB2O60315 1214 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 BRINP1O60477 761 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 FARP2O94887 1054 aaPredicted RBP6.56□□□□□ -1.36
VBP1-202ENST00000460509 C8BP07358 591 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 MMEP08473 750 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 POU3F3P20264 500 aaPredicted RBP6.56□□□□□ -1.36
VBP1-202ENST00000460509 LSSP48449 732 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 FOXO4P98177 505 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 STAT4Q14765 748 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 VASNQ6EMK4 673 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 HDGFL2Q7Z4V5 671 aaPredicted RBP6.56□□□□□ -1.36
VBP1-202ENST00000460509 IGDCC3Q8IVU1 814 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 CPA5Q8WXQ8 436 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 DLG3Q92796 817 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 FAM84AQ96KN4 292 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 GBP4Q96PP9 640 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 SLC38A3Q99624 504 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 GCM1Q9NP62 436 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 SLC39A2Q9NP94 309 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 EMC7Q9NPA0 242 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 ACSS2Q9NR19 701 aa6.56□□□□□ -1.36
VBP1-202ENST00000460509 IRS2Q9Y4H2 1338 aa6.55□□□□□ -1.36
VBP1-202ENST00000460509 BPIP17213 487 aa6.55□□□□□ -1.36
VBP1-202ENST00000460509 CDK11BP21127 795 aaKnown RBP6.55□□□□□ -1.36
VBP1-202ENST00000460509 FBLN1P23142 703 aa6.55□□□□□ -1.36
VBP1-202ENST00000460509 PTX3P26022 381 aaPredicted RBP6.55□□□□□ -1.36
VBP1-202ENST00000460509 ZNF648Q5T619 568 aaPredicted RBP6.55□□□□□ -1.36
VBP1-202ENST00000460509 CD276Q5ZPR3 534 aa6.55□□□□□ -1.36
VBP1-202ENST00000460509 IQSEC1Q6DN90 963 aa6.55□□□□□ -1.36
VBP1-202ENST00000460509 CC2D1AQ6P1N0 951 aaPredicted RBP6.55□□□□□ -1.36
VBP1-202ENST00000460509 LHFPL2Q6ZUX7 228 aa6.55□□□□□ -1.36
VBP1-202ENST00000460509 EFHBQ8N7U6 833 aa6.55□□□□□ -1.36
VBP1-202ENST00000460509 PRPF38AQ8NAV1 312 aaKnown RBP6.55□□□□□ -1.36
VBP1-202ENST00000460509 ZSWIM3Q96MP5 696 aa6.55□□□□□ -1.36
VBP1-202ENST00000460509 APOBEC2Q9Y235 224 aaKnown RBP6.55□□□□□ -1.36
VBP1-202ENST00000460509 SPO11Q9Y5K1 396 aa6.55□□□□□ -1.36
VBP1-202ENST00000460509 IRAK3Q9Y616 596 aa6.55□□□□□ -1.36
VBP1-202ENST00000460509 ARID1BQ8NFD5 2236 aaPredicted RBP6.55□□□□□ -1.36
VBP1-202ENST00000460509 PRAMEF22A3QJZ6 481 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 NFIBO00712 420 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 RAB11FIP3O75154 756 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 EYA4O95677 639 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 CYP17A1P05093 508 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 ENO2P09104 434 aaPredicted RBP6.54□□□□□ -1.36
VBP1-202ENST00000460509 CDKN1CP49918 316 aaPredicted RBP6.54□□□□□ -1.36
VBP1-202ENST00000460509 PFKPQ01813 784 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 DBPQ10586 325 aaPredicted RBP6.54□□□□□ -1.36
VBP1-202ENST00000460509 DDB1Q16531 1140 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 CATSPEREQ5SY80 951 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 PHF19Q5T6S3 580 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 PRAMEF18Q5VWM3 479 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 CREB3L3Q68CJ9 461 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 ATG14Q6ZNE5 492 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 B3GNT8Q7Z7M8 397 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 BRINP2Q9C0B6 783 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 UCKL1Q9NWZ5 548 aa6.54□□□□□ -1.36
VBP1-202ENST00000460509 TCAF2A6NFQ2 919 aa6.53□□□□□ -1.36
VBP1-202ENST00000460509 RASSF10A6NK89 507 aa6.53□□□□□ -1.36
VBP1-202ENST00000460509 TGM5O43548 720 aa6.53□□□□□ -1.36
VBP1-202ENST00000460509 GLRBP48167 497 aa6.53□□□□□ -1.36
VBP1-202ENST00000460509 MESP2Q0VG99 397 aa6.53□□□□□ -1.36
VBP1-202ENST00000460509 SMAD4Q13485 552 aaKnown RBP6.53□□□□□ -1.36
VBP1-202ENST00000460509 RNF219Q5W0B1 726 aaPredicted RBP6.53□□□□□ -1.36
VBP1-202ENST00000460509 LIPIQ6XZB0 460 aa6.53□□□□□ -1.36
VBP1-202ENST00000460509 ANKRD13AQ8IZ07 590 aa6.53□□□□□ -1.36
VBP1-202ENST00000460509 ASB15Q8WXK1 588 aa6.53□□□□□ -1.36
VBP1-202ENST00000460509 SIGLEC10Q96LC7 697 aa6.53□□□□□ -1.36
VBP1-202ENST00000460509 GORASP1Q9BQQ3 440 aa6.53□□□□□ -1.36
VBP1-202ENST00000460509 CROTQ9UKG9 612 aa6.53□□□□□ -1.36
VBP1-202ENST00000460509 CNOT6Q9ULM6 557 aaKnown RBP6.53□□□□□ -1.36
VBP1-202ENST00000460509 GPR39O43194 453 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 SDHAP31040 664 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms