RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 SETD4Q9NVD3 440 aa20.11■□□□□ 0.81
PLOD3-209ENST00000460475 TANC1Q9C0D5 1861 aa20.11■□□□□ 0.81
PLOD3-209ENST00000460475 TET1Q8NFU7 2136 aa20.11■□□□□ 0.81
PLOD3-209ENST00000460475 SZT2Q5T011 3432 aa20.11■□□□□ 0.81
PLOD3-209ENST00000460475 SLC37A4O43826 429 aa20.1■□□□□ 0.81
PLOD3-209ENST00000460475 CCL23P55773 120 aa20.1■□□□□ 0.81
PLOD3-209ENST00000460475 SAFBQ15424 915 aaKnown RBP eCLIP20.1■□□□□ 0.81
PLOD3-209ENST00000460475 SHHQ15465 462 aa20.1■□□□□ 0.81
PLOD3-209ENST00000460475 C9orf50Q5SZB4 431 aa20.1■□□□□ 0.81
PLOD3-209ENST00000460475 MIS18BP1Q6P0N0 1132 aa20.1■□□□□ 0.81
PLOD3-209ENST00000460475 RETREG2Q8NC44 543 aa20.1■□□□□ 0.81
PLOD3-209ENST00000460475 LMBR1Q8WVP7 490 aa20.1■□□□□ 0.81
PLOD3-209ENST00000460475 ATP6V0A1Q93050 837 aa20.1■□□□□ 0.81
PLOD3-209ENST00000460475 PCDHA10Q9Y5I2 948 aa20.1■□□□□ 0.81
PLOD3-209ENST00000460475 SCN5AQ14524 2016 aa20.1■□□□□ 0.81
PLOD3-209ENST00000460475 TBX3O15119 743 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 TREHO43280 583 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 GAS7O60861 476 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 IQCF3P0C7M6 154 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 RFC2P35250 354 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 FOSBP53539 338 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 PLCB4Q15147 1175 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 TMEM240Q5SV17 173 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 LRCH2Q5VUJ6 765 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 FAM160B1Q5W0V3 765 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 CCDC60Q8IWA6 550 aaPredicted RBP20.09■□□□□ 0.81
PLOD3-209ENST00000460475 TNPO1Q92973 898 aaKnown RBP20.09■□□□□ 0.81
PLOD3-209ENST00000460475 WNT8BQ93098 351 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 FAM20AQ96MK3 541 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 TEKT3Q9BXF9 490 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 FOXP1Q9H334 677 aaPredicted RBP20.09■□□□□ 0.81
PLOD3-209ENST00000460475 TCEAL9Q9UHQ7 104 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 KIF3AQ9Y496 699 aa20.09■□□□□ 0.81
PLOD3-209ENST00000460475 MAFBQ9Y5Q3 323 aaPredicted RBP20.09■□□□□ 0.81
PLOD3-209ENST00000460475 MBLAC1A4D2B0 266 aaPredicted RBP20.08■□□□□ 0.81
PLOD3-209ENST00000460475 WDR64B1ANS9 1081 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 CCNT1O60563 726 aaKnown RBP20.08■□□□□ 0.81
PLOD3-209ENST00000460475 PSAPP07602 524 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 CKBP12277 381 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 SELPP16109 830 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 MARK3P27448 753 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 SFNP31947 248 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 FXR1P51114 621 aaKnown RBP eCLIP20.08■□□□□ 0.81
PLOD3-209ENST00000460475 GUCY1B3Q02153 619 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 PPFIA1Q13136 1202 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 SWSAP1Q6NVH7 229 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 PSRC1Q6PGN9 363 aaPredicted RBP20.08■□□□□ 0.81
PLOD3-209ENST00000460475 RPUSD2Q8IZ73 545 aaKnown RBP20.08■□□□□ 0.81
PLOD3-209ENST00000460475 RDM1Q8NG50 284 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 GJA10Q969M2 543 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 SCLYQ96I15 445 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.08■□□□□ 0.81
PLOD3-209ENST00000460475 ZNF302Q9NR11 478 aa20.08■□□□□ 0.81
PLOD3-209ENST00000460475 RRN3P2A6NIE6 340 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 BACH1O14867 736 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 PARNO95453 639 aaKnown RBP20.07■□□□□ 0.8
PLOD3-209ENST00000460475 PFKMP08237 780 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 INSRRP14616 1297 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 JAK3P52333 1124 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 CUL4AQ13619 759 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 GRIK4Q16099 956 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 MARCH8Q5T0T0 291 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 RASIP1Q5U651 963 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 TRAF7Q6Q0C0 670 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 RPAINQ86UA6 219 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 HAS1Q92839 578 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 UNC45AQ9H3U1 944 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 DISC1Q9NRI5 854 aa20.07■□□□□ 0.8
PLOD3-209ENST00000460475 POTEB3A0JP26 581 aa20.06■□□□□ 0.8
PLOD3-209ENST00000460475 CAND2O75155 1236 aa20.06■□□□□ 0.8
PLOD3-209ENST00000460475 ATP4AP20648 1035 aa20.06■□□□□ 0.8
PLOD3-209ENST00000460475 U2AF2P26368 475 aaKnown RBP eCLIP20.06■□□□□ 0.8
PLOD3-209ENST00000460475 PDXDC2PQ6P474 469 aa20.06■□□□□ 0.8
PLOD3-209ENST00000460475 POTEBQ6S5H4 581 aa20.06■□□□□ 0.8
PLOD3-209ENST00000460475 ZNF365Q70YC5 407 aa20.06■□□□□ 0.8
PLOD3-209ENST00000460475 LRRC8DQ7L1W4 858 aa20.06■□□□□ 0.8
PLOD3-209ENST00000460475 ATP8B4Q8TF62 1192 aa20.06■□□□□ 0.8
PLOD3-209ENST00000460475 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.06■□□□□ 0.8
PLOD3-209ENST00000460475 IGSF9BQ9UPX0 1349 aa20.05■□□□□ 0.8
PLOD3-209ENST00000460475 HBP1O60381 514 aa20.05■□□□□ 0.8
PLOD3-209ENST00000460475 ACRP10323 421 aa20.05■□□□□ 0.8
PLOD3-209ENST00000460475 PPP2R5CQ13362 524 aa20.05■□□□□ 0.8
PLOD3-209ENST00000460475 GPNMBQ14956 572 aa20.05■□□□□ 0.8
PLOD3-209ENST00000460475 ZNF618Q5T7W0 954 aa20.05■□□□□ 0.8
PLOD3-209ENST00000460475 TAF2Q6P1X5 1199 aa20.05■□□□□ 0.8
PLOD3-209ENST00000460475 HERVK_113Q902F9 699 aa20.05■□□□□ 0.8
PLOD3-209ENST00000460475 TUBE1Q9UJT0 475 aa20.05■□□□□ 0.8
PLOD3-209ENST00000460475 VAV3Q9UKW4 847 aa20.05■□□□□ 0.8
PLOD3-209ENST00000460475 TRPC6Q9Y210 931 aa20.05■□□□□ 0.8
PLOD3-209ENST00000460475 SOX1O00570 391 aaPredicted RBP20.04■□□□□ 0.8
PLOD3-209ENST00000460475 WNT7AO00755 349 aa20.04■□□□□ 0.8
PLOD3-209ENST00000460475 FGBP02675 491 aa20.04■□□□□ 0.8
PLOD3-209ENST00000460475 CXCL10P02778 98 aa20.04■□□□□ 0.8
PLOD3-209ENST00000460475 GJB2P29033 226 aa20.04■□□□□ 0.8
PLOD3-209ENST00000460475 POTEDQ86YR6 584 aa20.04■□□□□ 0.8
PLOD3-209ENST00000460475 NOSTRINQ8IVI9 506 aa20.04■□□□□ 0.8
PLOD3-209ENST00000460475 SLFN12Q8IYM2 578 aa20.04■□□□□ 0.8
PLOD3-209ENST00000460475 BBXQ8WY36 941 aaPredicted RBP20.04■□□□□ 0.8
PLOD3-209ENST00000460475 RNPC3Q96LT9 517 aaKnown RBP20.04■□□□□ 0.8
PLOD3-209ENST00000460475 GABBR1Q9UBS5 961 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms