RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 MCM3APO60318 1980 aa27.19■■□□□ 1.94
U2AF1-204ENST00000459639 FRMD3A2A2Y4 597 aa27.18■■□□□ 1.94
U2AF1-204ENST00000459639 IGF2BP3O00425 579 aaKnown RBP eCLIP27.18■■□□□ 1.94
U2AF1-204ENST00000459639 STK4Q13043 487 aa27.18■■□□□ 1.94
U2AF1-204ENST00000459639 COASYQ13057 564 aa27.18■■□□□ 1.94
U2AF1-204ENST00000459639 PIGOQ8TEQ8 1089 aa27.18■■□□□ 1.94
U2AF1-204ENST00000459639 NELFBQ8WX92 580 aa27.18■■□□□ 1.94
U2AF1-204ENST00000459639 CCDC102AQ96A19 550 aa27.18■■□□□ 1.94
U2AF1-204ENST00000459639 FANCLQ9NW38 375 aa27.18■■□□□ 1.94
U2AF1-204ENST00000459639 SLC9A2Q9UBY0 812 aa27.18■■□□□ 1.94
U2AF1-204ENST00000459639 PSMA7O14818 248 aa27.17■■□□□ 1.94
U2AF1-204ENST00000459639 SEPT14Q6ZU15 432 aa27.17■■□□□ 1.94
U2AF1-204ENST00000459639 KIAA0895Q8NCT3 520 aa27.17■■□□□ 1.94
U2AF1-204ENST00000459639 DHTKD1Q96HY7 919 aaPredicted RBP27.17■■□□□ 1.94
U2AF1-204ENST00000459639 HHIPL1Q96JK4 782 aa27.17■■□□□ 1.94
U2AF1-204ENST00000459639 KCND2Q9NZV8 630 aa27.17■■□□□ 1.94
U2AF1-204ENST00000459639 PCDHA10Q9Y5I2 948 aa27.17■■□□□ 1.94
U2AF1-204ENST00000459639 IVNS1ABPQ9Y6Y0 642 aa27.17■■□□□ 1.94
U2AF1-204ENST00000459639 PSMC5P62195 406 aa27.17■■□□□ 1.94
U2AF1-204ENST00000459639 GIT2Q14161 759 aa27.17■■□□□ 1.94
U2AF1-204ENST00000459639 ASB14A6NK59 587 aa27.16■■□□□ 1.94
U2AF1-204ENST00000459639 FAM155AB1AL88 458 aaPredicted RBP27.16■■□□□ 1.94
U2AF1-204ENST00000459639 TGFB3P10600 412 aa27.16■■□□□ 1.94
U2AF1-204ENST00000459639 ZNF18P17022 549 aa27.16■■□□□ 1.94
U2AF1-204ENST00000459639 STX17P56962 302 aa27.16■■□□□ 1.94
U2AF1-204ENST00000459639 RINT1Q6NUQ1 792 aa27.16■■□□□ 1.94
U2AF1-204ENST00000459639 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.16■■□□□ 1.94
U2AF1-204ENST00000459639 C4orf19Q8IY42 314 aa27.16■■□□□ 1.94
U2AF1-204ENST00000459639 MRFAP1L1Q96HT8 127 aa27.16■■□□□ 1.94
U2AF1-204ENST00000459639 DBR1Q9UK59 544 aaKnown RBP27.16■■□□□ 1.94
U2AF1-204ENST00000459639 MAPK8IP1Q9UQF2 711 aa27.16■■□□□ 1.94
U2AF1-204ENST00000459639 NPHP3-ACAD11A0A0J9YXS1 232 aa27.15■■□□□ 1.94
U2AF1-204ENST00000459639 ADORA2AP29274 412 aa27.15■■□□□ 1.94
U2AF1-204ENST00000459639 MAPK4P31152 587 aa27.15■■□□□ 1.94
U2AF1-204ENST00000459639 SP2Q02086 613 aa27.15■■□□□ 1.94
U2AF1-204ENST00000459639 TAF1CQ15572 869 aaPredicted RBP27.15■■□□□ 1.94
U2AF1-204ENST00000459639 ZNF792Q3KQV3 632 aa27.15■■□□□ 1.94
U2AF1-204ENST00000459639 KCNV1Q6PIU1 500 aa27.15■■□□□ 1.94
U2AF1-204ENST00000459639 REEP2Q9BRK0 252 aa27.15■■□□□ 1.94
U2AF1-204ENST00000459639 RUSC1Q9BVN2 902 aa27.15■■□□□ 1.94
U2AF1-204ENST00000459639 SLC39A2Q9NP94 309 aa27.15■■□□□ 1.94
U2AF1-204ENST00000459639 ABT1Q9ULW3 272 aaKnown RBP27.15■■□□□ 1.94
U2AF1-204ENST00000459639 TMEM88BA6NKF7 163 aa27.14■■□□□ 1.94
U2AF1-204ENST00000459639 PSAPP07602 524 aa27.14■■□□□ 1.94
U2AF1-204ENST00000459639 CDC25BP30305 580 aa27.14■■□□□ 1.94
U2AF1-204ENST00000459639 FAM26FQ5R3K3 315 aa27.14■■□□□ 1.94
U2AF1-204ENST00000459639 GPR142Q7Z601 462 aa27.14■■□□□ 1.94
U2AF1-204ENST00000459639 IFNL1Q8IU54 200 aa27.14■■□□□ 1.94
U2AF1-204ENST00000459639 HPS3Q969F9 1004 aa27.14■■□□□ 1.94
U2AF1-204ENST00000459639 ARID2Q68CP9 1835 aa27.14■■□□□ 1.93
U2AF1-204ENST00000459639 DKC1O60832 514 aaKnown RBP eCLIP27.14■■□□□ 1.93
U2AF1-204ENST00000459639 UBA1P22314 1058 aaKnown RBP27.14■■□□□ 1.93
U2AF1-204ENST00000459639 ACTR2P61160 394 aa27.14■■□□□ 1.93
U2AF1-204ENST00000459639 SREBF2Q12772 1141 aa27.14■■□□□ 1.93
U2AF1-204ENST00000459639 C1orf186Q6ZWK4 172 aa27.14■■□□□ 1.93
U2AF1-204ENST00000459639 MYH9P35579 1960 aaKnown RBP27.14■■□□□ 1.93
U2AF1-204ENST00000459639 ARHGEF35A5YM69 484 aa27.13■■□□□ 1.93
U2AF1-204ENST00000459639 ZBTB39O15060 712 aa27.13■■□□□ 1.93
U2AF1-204ENST00000459639 ATP1A3P13637 1013 aa27.13■■□□□ 1.93
U2AF1-204ENST00000459639 FANCCQ00597 558 aa27.13■■□□□ 1.93
U2AF1-204ENST00000459639 GRB14Q14449 540 aa27.13■■□□□ 1.93
U2AF1-204ENST00000459639 NEDD9Q14511 834 aa27.13■■□□□ 1.93
U2AF1-204ENST00000459639 UGCGQ16739 394 aa27.13■■□□□ 1.93
U2AF1-204ENST00000459639 ZNF467Q7Z7K2 595 aaPredicted RBP27.13■■□□□ 1.93
U2AF1-204ENST00000459639 GUF1Q8N442 669 aaKnown RBP27.13■■□□□ 1.93
U2AF1-204ENST00000459639 MYH11P35749 1972 aa27.13■■□□□ 1.93
U2AF1-204ENST00000459639 BICDL2A1A5D9 508 aa27.12■■□□□ 1.93
U2AF1-204ENST00000459639 TOMM70O94826 608 aa27.12■■□□□ 1.93
U2AF1-204ENST00000459639 CCNE1P24864 410 aa27.12■■□□□ 1.93
U2AF1-204ENST00000459639 CACNB1Q02641 598 aaPredicted RBP27.12■■□□□ 1.93
U2AF1-204ENST00000459639 RAD51AP2Q09MP3 1159 aa27.12■■□□□ 1.93
U2AF1-204ENST00000459639 TPD52L1Q16890 204 aaPredicted RBP27.12■■□□□ 1.93
U2AF1-204ENST00000459639 CDKAL1Q5VV42 579 aa27.12■■□□□ 1.93
U2AF1-204ENST00000459639 MIS18BP1Q6P0N0 1132 aa27.12■■□□□ 1.93
U2AF1-204ENST00000459639 PLEKHH3Q7Z736 793 aa27.12■■□□□ 1.93
U2AF1-204ENST00000459639 ATP6V0A1Q93050 837 aa27.12■■□□□ 1.93
U2AF1-204ENST00000459639 BCAS3Q9H6U6 928 aa27.12■■□□□ 1.93
U2AF1-204ENST00000459639 COBLO75128 1261 aa27.11■■□□□ 1.93
U2AF1-204ENST00000459639 TBCAO75347 108 aaKnown RBP27.11■■□□□ 1.93
U2AF1-204ENST00000459639 YWHABP31946 246 aaKnown RBP27.11■■□□□ 1.93
U2AF1-204ENST00000459639 HERC4Q5GLZ8 1057 aaPredicted RBP27.11■■□□□ 1.93
U2AF1-204ENST00000459639 ABHD15Q6UXT9 468 aa27.11■■□□□ 1.93
U2AF1-204ENST00000459639 CYFIP1Q7L576 1253 aa27.11■■□□□ 1.93
U2AF1-204ENST00000459639 P2RX5Q93086 422 aa27.11■■□□□ 1.93
U2AF1-204ENST00000459639 SAMSN1Q9NSI8 373 aaKnown RBP27.11■■□□□ 1.93
U2AF1-204ENST00000459639 CPA4Q9UI42 421 aa27.11■■□□□ 1.93
U2AF1-204ENST00000459639 PCDHA2Q9Y5H9 948 aa27.11■■□□□ 1.93
U2AF1-204ENST00000459639 GAP43P17677 238 aa27.11■■□□□ 1.93
U2AF1-204ENST00000459639 GUCY2CP25092 1073 aa27.11■■□□□ 1.93
U2AF1-204ENST00000459639 TRIM44Q96DX7 344 aaPredicted RBP27.11■■□□□ 1.93
U2AF1-204ENST00000459639 ANKEF1Q9NU02 776 aa27.11■■□□□ 1.93
U2AF1-204ENST00000459639 ODF2LQ9ULJ1 636 aa27.11■■□□□ 1.93
U2AF1-204ENST00000459639 DIS3Q9Y2L1 958 aaKnown RBP27.11■■□□□ 1.93
U2AF1-204ENST00000459639 COL4A3BPQ9Y5P4 624 aa27.11■■□□□ 1.93
U2AF1-204ENST00000459639 FARP2O94887 1054 aaPredicted RBP27.1■■□□□ 1.93
U2AF1-204ENST00000459639 ATG7O95352 703 aa27.1■■□□□ 1.93
U2AF1-204ENST00000459639 SUPT20HL2P0C7V6 817 aa27.1■■□□□ 1.93
U2AF1-204ENST00000459639 RARRES1P49788 294 aa27.1■■□□□ 1.93
U2AF1-204ENST00000459639 TTI2Q6NXR4 508 aa27.1■■□□□ 1.93
U2AF1-204ENST00000459639 ARMCX2Q7L311 632 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms