RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 PGRMC1O00264 195 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 KLHL30Q0D2K2 578 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 IFI16Q16666 785 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 TMC3Q7Z5M5 1100 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 LRRC57Q8N9N7 239 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 RAD54LQ92698 747 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 MTMR9Q96QG7 549 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 SLITRK6Q9H5Y7 841 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 NOVA2Q9UNW9 492 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 ROBO3Q96MS0 1386 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 SART1O43290 800 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 GNA14O95837 355 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 ASIC2Q16515 512 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 ODF2Q5BJF6 829 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 DYMQ7RTS9 669 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 CEP57Q86XR8 500 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 UBLCP1Q8WVY7 318 aaPredicted RBP20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 TLCD1Q96CP7 247 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 HVCN1Q96D96 273 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 CAMKK2Q96RR4 588 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.68■□□□□ 0.92e-10■■□□□ 13.4
SEMA3B-208ENST00000456210 SPZ1Q9BXG8 430 aa20.68■□□□□ 0.9
SEMA3B-208ENST00000456210 SCP2P22307 547 aa20.67■□□□□ 0.9
SEMA3B-208ENST00000456210 GNA11P29992 359 aa20.67■□□□□ 0.9
SEMA3B-208ENST00000456210 RAPGEF1Q13905 1077 aa20.67■□□□□ 0.9
SEMA3B-208ENST00000456210 DDX42Q86XP3 938 aaKnown RBP eCLIP20.67■□□□□ 0.9
SEMA3B-208ENST00000456210 MYOCDQ8IZQ8 938 aa20.67■□□□□ 0.9
SEMA3B-208ENST00000456210 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.67■□□□□ 0.9
SEMA3B-208ENST00000456210 GANQ9H2C0 597 aa20.67■□□□□ 0.9
SEMA3B-208ENST00000456210 C6orf50Q9HD87 102 aa20.67■□□□□ 0.9
SEMA3B-208ENST00000456210 ADAMTS1Q9UHI8 967 aa20.67■□□□□ 0.9
SEMA3B-208ENST00000456210 RGL2O15211 777 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 NAPAP54920 295 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 TRIM59Q8IWR1 403 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 RASGEF1CQ8N431 466 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 FAM84BQ96KN1 310 aaPredicted RBP20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 PSMD1Q99460 953 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 NOC2LQ9Y3T9 749 aaKnown RBP20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 F8VZ95 297 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 PPIP5K2O43314 1243 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 CEP104O60308 925 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 MAGOHP61326 146 aaKnown RBP20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 SEPT2Q15019 361 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 ERMARDQ5T6L9 678 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 TEX11Q8IYF3 940 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 DDX12PQ92771 950 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 MAGOHBQ96A72 148 aaKnown RBP20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 SCLT1Q96NL6 688 aa20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 BCCIPQ9P287 314 aaKnown RBP eCLIP20.66■□□□□ 0.9
SEMA3B-208ENST00000456210 F8W031 263 aaPredicted RBP20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 GSTA1P08263 222 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 ERCC3P19447 782 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 FLT3P36888 993 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 EIF3BP55884 814 aaKnown RBP20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 TMEM119Q4V9L6 283 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 CPLX4Q7Z7G2 160 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 FAM133AQ8N9E0 248 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 GLIS3Q8NEA6 775 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 TBCKQ8TEA7 893 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 CHMP6Q96FZ7 201 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 CDK5RAP3Q96JB5 506 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 FAM129AQ9BZQ8 928 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 GOLGB1Q14789 3259 aaKnown RBP20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 SMCO2A6NFE2 343 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 TXKP42681 527 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 RC3H1Q5TC82 1133 aaKnown RBP20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 C12orf60Q5U649 245 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 FBXO33Q7Z6M2 555 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 FAM114A2Q9NRY5 505 aa20.65■□□□□ 0.9
SEMA3B-208ENST00000456210 DCDC2CA8MYV0 355 aa20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 TRAF5O00463 557 aa20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 SSBP05455 408 aaKnown RBP eCLIP20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 BAG6P46379 1132 aa20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 ELF3P78545 371 aaPredicted RBP20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 LRRC41Q15345 812 aa20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 TMEM266Q2M3C6 531 aa20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 ZC3H3Q8IXZ2 948 aaKnown RBP20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 METTL13Q8N6R0 699 aa20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 XPO6Q96QU8 1125 aaKnown RBP20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 TXLNGYQ9BZA5 131 aa20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 DDX47Q9H0S4 455 aaKnown RBP20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 MCM9Q9NXL9 1143 aa20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.64■□□□□ 0.898e-7■■□□□ 11.8
SEMA3B-208ENST00000456210 TAF1P21675 1872 aa20.64■□□□□ 0.89
SEMA3B-208ENST00000456210 ESYT2A0FGR8 921 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 WTIPA6NIX2 430 aaPredicted RBP20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 CCT8L1PA6NM43 557 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 PHF20L1A8MW92 1017 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 DAPK3O43293 454 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 ATP6V1G2O95670 118 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 COASYQ13057 564 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 PDIA5Q14554 519 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 CALCRLQ16602 461 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 KRT71Q3SY84 523 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 SLFN11Q7Z7L1 901 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 CCDC26Q8TAB7 109 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 AP1M1Q9BXS5 423 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 BZW2Q9Y6E2 419 aaKnown RBP20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 NAV1Q8NEY1 1877 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms