RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 ZWILCHQ9H900 591 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 TMEM165Q9HC07 324 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 TMOD2Q9NZR1 351 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 FAM184BQ9ULE4 1060 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 ZNF510Q9Y2H8 683 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 ATRNL1Q5VV63 1379 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 ADAMTS3O15072 1205 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 ATP6V1G1O75348 118 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 VIMP08670 466 aaKnown RBP8.37□□□□□ -1.07
HDAC9-218ENST00000456174 ALADP13716 330 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 CTCFP49711 727 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-218ENST00000456174 CCNG1P51959 295 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 CERKLQ49MI3 558 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-218ENST00000456174 RESP18Q5W5W9 173 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 BLIDQ8IZY5 108 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 SLC35F6Q8N357 371 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 C1orf131Q8NDD1 294 aaKnown RBP8.37□□□□□ -1.07
HDAC9-218ENST00000456174 TBC1D31Q96DN5 1066 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 RRP36Q96EU6 259 aaKnown RBP8.37□□□□□ -1.07
HDAC9-218ENST00000456174 PANX2Q96RD6 677 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 NAA15Q9BXJ9 866 aaKnown RBP8.37□□□□□ -1.07
HDAC9-218ENST00000456174 TAOK3Q9H2K8 898 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 VAT1LQ9HCJ6 419 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 FANCLQ9NW38 375 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 BARHL2Q9NY43 387 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 WDR35Q9P2L0 1181 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 FBXO2Q9UK22 296 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-218ENST00000456174 PCDHA4Q9UN74 947 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 COL2A1P02458 1487 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-218ENST00000456174 FRMPD2Q68DX3 1309 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-218ENST00000456174 ARFGEF1Q9Y6D6 1849 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 CLRN2A0PK11 232 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 TCP10L2B9ZVM9 353 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 STXBP3O00186 592 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 CREB3O43889 395 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SERPINC1P01008 464 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 PENKP01210 267 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SNHG28P0DPA3 235 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 ZNF24P17028 368 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 PTPREP23469 700 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 DSG3P32926 999 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 ABL2P42684 1182 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SYKP43405 635 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 MYL5Q02045 173 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 CXCL9Q07325 125 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 TMED1Q13445 227 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SPRED3Q2MJR0 410 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 GNPTABQ3T906 1256 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 PABPC1LQ4VXU2 614 aaKnown RBP8.36□□□□□ -1.07
HDAC9-218ENST00000456174 ASPRV1Q53RT3 343 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SPECC1Q5M775 1068 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 PPP1R15BQ5SWA1 713 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 TYW1BQ6NUM6 668 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 TATDN1Q6P1N9 297 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 PIK3AP1Q6ZUJ8 805 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 AGBL3Q8NEM8 1001 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 JDP2Q8WYK2 163 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 UBA5Q9GZZ9 404 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 ZNF70Q9UC06 446 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SEC63Q9UGP8 760 aaKnown RBP8.36□□□□□ -1.07
HDAC9-218ENST00000456174 HPSEQ9Y251 543 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 CD2APQ9Y5K6 639 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 FAM237AA0A1B0GTK4 181 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 C5orf60A6NFR6 353 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SMIM24O75264 130 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 PAX3P23760 479 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 RPL13P26373 211 aaKnown RBP8.36□□□□□ -1.07
HDAC9-218ENST00000456174 ALDH3A1P30838 453 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 MAGEA10P43363 369 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-218ENST00000456174 INHBCP55103 352 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SHROOM1Q2M3G4 852 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SGSM1Q2NKQ1 1148 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 TTC38Q5R3I4 469 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SFMBT2Q5VUG0 894 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 GALNT17Q6IS24 598 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 METTL16Q86W50 562 aaKnown RBP8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SDR16C5Q8N3Y7 309 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 TEKT4Q8WW24 435 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 ARL8AQ96BM9 186 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 CYFIP2Q96F07 1278 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 PIGSQ96S52 555 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 CSRNP1Q96S65 589 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SGIP1Q9BQI5 828 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 RIOX1Q9H6W3 641 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 KANSL2Q9H9L4 492 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 GPCPD1Q9NPB8 672 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 BCS1LQ9Y276 419 aa8.36□□□□□ -1.07
HDAC9-218ENST00000456174 SRPRBQ9Y5M8 271 aaKnown RBP8.36□□□□□ -1.07
HDAC9-218ENST00000456174 A0A1B0GVG6 124 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 LRRC10BA6NIK2 292 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 NFKBIEO00221 500 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 WNT7AO00755 349 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 BMP15O95972 392 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 TFRCP02786 760 aaKnown RBP8.35□□□□□ -1.07
HDAC9-218ENST00000456174 TRAPPC10P48553 1259 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 SCNN1BP51168 640 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 APBA1Q02410 837 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 GRIN1Q05586 938 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 ZNF543Q08ER8 600 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 PABPC4Q13310 644 aaKnown RBP eCLIP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms