RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 CRLF3Q8IUI8 442 aa13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 TFR2Q9UP52 801 aa13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 COL4A3BPQ9Y5P4 624 aa13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 F8W031 263 aaPredicted RBP13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 TMCC1O94876 653 aa13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 CACNB1Q02641 598 aaPredicted RBP13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 MDH1BQ5I0G3 518 aa13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 HP1BP3Q5SSJ5 553 aaPredicted RBP13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 SWT1Q5T5J6 900 aaKnown RBP13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 GRAMD1AQ96CP6 724 aa13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 NMD3Q96D46 503 aaKnown RBP13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 NAP1L4Q99733 375 aaKnown RBP13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 ANKRD2Q9GZV1 360 aa13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 LGR6Q9HBX8 967 aa13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 PHF8Q9UPP1 1060 aa13.29□□□□□ -0.28
NEDD4L-208ENST00000456173 KRT3P12035 628 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 NOP14P78316 857 aaKnown RBP13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 FMR1Q06787 632 aaKnown RBP eCLIP13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 ZCWPW2Q504Y3 356 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 RNF169Q8NCN4 708 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 ANKZF1Q9H8Y5 726 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 ALG13Q9NP73 1137 aaKnown RBP13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 GINM1Q9NU53 330 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 FIS1Q9Y3D6 152 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 EIF2AK4Q9P2K8 1649 aaKnown RBP13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 A2MP01023 1474 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 DDX42Q86XP3 938 aaKnown RBP eCLIP13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 IFNL3Q8IZI9 196 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 OPTNQ96CV9 577 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 METTL14Q9HCE5 456 aaKnown RBP13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 GRID2IPA4D2P6 1211 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 SH3BP5O60239 455 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 MARK3P27448 753 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 MAPK4P31152 587 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 TRPC1P48995 793 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 CCDC15Q0P6D6 951 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 CNGA3Q16281 694 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 PREPLQ4J6C6 727 aaPredicted RBP13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 ATG16L1Q676U5 607 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 LRRC34Q8IZ02 419 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.28□□□□□ -0.286e-7■■□□□ 14.3
NEDD4L-208ENST00000456173 C15orf41Q9Y2V0 281 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 NOC2LQ9Y3T9 749 aaKnown RBP13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 DMPKQ09013 629 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 LRIG3Q6UXM1 1119 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 BZW1Q7L1Q6 419 aaKnown RBP13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 TMC4Q7Z404 712 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 MFN1Q8IWA4 741 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 PARD3BQ8TEW8 1205 aa13.28□□□□□ -0.28
NEDD4L-208ENST00000456173 GNGT2O14610 69 aa13.27□□□□□ -0.28
NEDD4L-208ENST00000456173 HSPA2P54652 639 aa13.27□□□□□ -0.28
NEDD4L-208ENST00000456173 SHC4Q6S5L8 630 aa13.27□□□□□ -0.28
NEDD4L-208ENST00000456173 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.27□□□□□ -0.28
NEDD4L-208ENST00000456173 RAPGEF5Q92565 580 aa13.27□□□□□ -0.28
NEDD4L-208ENST00000456173 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.28
NEDD4L-208ENST00000456173 LIMA1Q9UHB6 759 aaKnown RBP13.27□□□□□ -0.28
NEDD4L-208ENST00000456173 ZRANB2O95218 330 aaKnown RBP eCLIP13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 AFPP02771 609 aaKnown RBP13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 GSTA1P08263 222 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 GSTA2P09210 222 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 PTPREP23469 700 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 PRCPP42785 496 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 WDR93Q6P2C0 686 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 RSRC2Q7L4I2 434 aaKnown RBP13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 SLC17A8Q8NDX2 589 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 DAB1O75553 588 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 ITGA6P23229 1130 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 CASP2P42575 452 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 STAG2Q8N3U4 1231 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 CASP10Q92851 521 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 CEP19Q96LK0 163 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 ZSCAN10Q96SZ4 725 aaPredicted RBP13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 USP40Q9NVE5 1235 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 UTP6Q9NYH9 597 aaKnown RBP13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 TTLL3Q9Y4R7 772 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 FLT4P35916 1363 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 NCOA3Q9Y6Q9 1424 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 KDM5DQ9BY66 1539 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 MAP3K19Q56UN5 1328 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 SEC24DO94855 1032 aaPredicted RBP13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 BASP1P80723 227 aaKnown RBP13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 MKRN3Q13064 507 aaKnown RBP13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 ZMYM1Q5SVZ6 1142 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 METTL16Q86W50 562 aaKnown RBP13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 WDR75Q8IWA0 830 aaKnown RBP13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 PYROXD1Q8WU10 500 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 GIMAP4Q9NUV9 329 aa13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 APOBEC2Q9Y235 224 aaKnown RBP13.27□□□□□ -0.29
NEDD4L-208ENST00000456173 CCDC195A0A1B0GUA6 201 aa13.26□□□□□ -0.29
NEDD4L-208ENST00000456173 ENO1P06733 434 aaKnown RBP13.26□□□□□ -0.29
NEDD4L-208ENST00000456173 ACADSP16219 412 aa13.26□□□□□ -0.29
NEDD4L-208ENST00000456173 DAB2P98082 770 aa13.26□□□□□ -0.29
NEDD4L-208ENST00000456173 APLFQ8IW19 511 aaPredicted RBP13.26□□□□□ -0.29
NEDD4L-208ENST00000456173 LARP4BQ92615 738 aaKnown RBP13.26□□□□□ -0.29
NEDD4L-208ENST00000456173 OLFML3Q9NRN5 406 aa13.26□□□□□ -0.29
NEDD4L-208ENST00000456173 UBAP1Q9NZ09 502 aa13.26□□□□□ -0.29
NEDD4L-208ENST00000456173 STRIP2Q9ULQ0 834 aa13.26□□□□□ -0.29
NEDD4L-208ENST00000456173 A0A1B0GTH6 734 aa13.26□□□□□ -0.29
NEDD4L-208ENST00000456173 AGTP01019 485 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms