RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 RWDD1Q9H446 243 aaPredicted RBP5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 VAT1LQ9HCJ6 419 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 TCP11L1Q9NUJ3 509 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 KLK14Q9P0G3 267 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 EGFL7Q9UHF1 273 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 TBX21Q9UL17 535 aa5.51□□□□□ -1.53
GTF3C3-208ENST00000455546 ELP1O95163 1332 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 NEDD4P46934 1319 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 CCDC171Q6TFL3 1326 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 KIAA1217Q5T5P2 1943 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 TTLL8A6PVC2 850 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 SOBPA7XYQ1 873 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 B4E1Z4 1266 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 ZNF213O14771 459 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 AXIN1O15169 862 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 B4GALT4O60513 344 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 RGS20O76081 388 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 AVPP01185 164 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 CD4P01730 458 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 MYL3P08590 195 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 ALDH5A1P51649 535 aaPredicted RBP5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 CCL23P55773 120 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 NUCB1Q02818 461 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 ZNF543Q08ER8 600 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 USH1GQ495M9 461 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 MFSD5Q6N075 450 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 BTNL9Q6UXG8 535 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 SLC30A10Q6XR72 485 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 RNF207Q6ZRF8 634 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 FAM126BQ8IXS8 530 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 SMC5Q8IY18 1101 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 MAFAQ8NHW3 353 aaPredicted RBP5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 DCAF4Q8WV16 495 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 PPM1EQ8WY54 764 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 COPS5Q92905 334 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 ZFP42Q96MM3 310 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 COL25A1Q9BXS0 654 aaPredicted RBP5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 WDR11Q9BZH6 1224 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 IL25Q9H293 177 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 ZNF576Q9H609 170 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 ZSWIM5Q9P217 1185 aa5.5□□□□□ -1.53
GTF3C3-208ENST00000455546 KAT6AQ92794 2004 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 NRG2O14511 850 aaPredicted RBP5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 TLR3O15455 904 aaKnown RBP5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 ZEB2O60315 1214 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 FGBP02675 491 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 CYP2C9P11712 490 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 MYOGP15173 224 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 FOSL2P15408 326 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 MAPK1P28482 360 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 GPC1P35052 558 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 RABGGTBP53611 331 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 MARSP56192 900 aaKnown RBP5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 CHMP4BP1P59074 171 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 RPS6P62753 249 aaKnown RBP5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 NKX3-2P78367 333 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 IRX6P78412 446 aaPredicted RBP5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 PPIGQ13427 754 aaKnown RBP eCLIP5.49□□□□□ -1.537e-6■□□□□ 9.9
GTF3C3-208ENST00000455546 ECM1Q16610 540 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 DUSP28Q4G0W2 176 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 SEPT14Q6ZU15 432 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 OTOP2Q7RTS6 562 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 LYSMD3Q7Z3D4 306 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 ATCAYQ86WG3 371 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 STAG2Q8N3U4 1231 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 TMEM199Q8N511 208 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 SLC43A3Q8NBI5 491 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 MORC4Q8TE76 937 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 SCLYQ96I15 445 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 TTC14Q96N46 770 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 TAAR1Q96RJ0 339 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 PBX4Q9BYU1 374 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 HIPK3Q9H422 1215 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 PRDM6Q9NQX0 595 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 TRMT13Q9NUP7 481 aaKnown RBP5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 DACH1Q9UI36 760 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 SUPT16HQ9Y5B9 1047 aaKnown RBP5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 CDH23Q9H251 3354 aa5.49□□□□□ -1.53
GTF3C3-208ENST00000455546 MROH7Q68CQ1 1323 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 LRRC37A2A6NM11 1700 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 PRRC2BQ5JSZ5 2229 aaKnown RBP5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 SCN10AQ9Y5Y9 1956 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 DOCK5Q9H7D0 1870 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 DGAT1O75907 488 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 CABYRO75952 493 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 ARIH2O95376 493 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 SNHG28P0DPA3 235 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 TXNP10599 105 aaKnown RBP5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 ARHGAP4P98171 946 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 PURAQ00577 322 aaKnown RBP5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 AAMPQ13685 434 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 CCDC85BQ15834 202 aaPredicted RBP5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 CDC37Q16543 378 aaPredicted RBP5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 LY6KQ17RY6 165 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 FAM47CQ5HY64 1035 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 CHST3Q7LGC8 479 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 DEFB128Q7Z7B8 93 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 DGKHQ86XP1 1220 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 ADGRF4Q8IZF3 695 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms