RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 STK38Q15208 465 aa16.08■□□□□ 0.16
HMGXB4-204ENST00000455359 HAUS3Q68CZ6 603 aa16.08■□□□□ 0.16
HMGXB4-204ENST00000455359 SWSAP1Q6NVH7 229 aa16.08■□□□□ 0.16
HMGXB4-204ENST00000455359 NFRKBQ6P4R8 1299 aa16.08■□□□□ 0.16
HMGXB4-204ENST00000455359 SESTD1Q86VW0 696 aa16.08■□□□□ 0.16
HMGXB4-204ENST00000455359 KCTD17Q8N5Z5 321 aa16.08■□□□□ 0.16
HMGXB4-204ENST00000455359 PAWRQ96IZ0 340 aaKnown RBP16.08■□□□□ 0.16
HMGXB4-204ENST00000455359 FAM167AQ96KS9 214 aa16.08■□□□□ 0.16
HMGXB4-204ENST00000455359 UIMC1Q96RL1 719 aa16.08■□□□□ 0.16
HMGXB4-204ENST00000455359 HSD17B14Q9BPX1 270 aa16.08■□□□□ 0.16
HMGXB4-204ENST00000455359 SRPRBQ9Y5M8 271 aaKnown RBP16.08■□□□□ 0.16
HMGXB4-204ENST00000455359 EML1O00423 815 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 LONP1P36776 959 aaKnown RBP16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 QARSP47897 775 aaKnown RBP16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 PSEN2P49810 448 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 SOX10P56693 466 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 PSMC5P62195 406 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 MFSD10Q14728 455 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 SNX17Q15036 470 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 UTP14CQ5TAP6 766 aaKnown RBP16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 NCAPH2Q6IBW4 605 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 CCDC60Q8IWA6 550 aaPredicted RBP16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 SLC43A3Q8NBI5 491 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 VTI1AQ96AJ9 217 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 PCYT2Q99447 389 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 SCAND2PQ9GZW5 306 aaPredicted RBP16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 LRWD1Q9UFC0 647 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 RCOR1Q9UKL0 485 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 TELO2Q9Y4R8 837 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 IGSF9BQ9UPX0 1349 aa16.07■□□□□ 0.16
HMGXB4-204ENST00000455359 SPTLC2O15270 562 aa16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 LYPLA2O95372 231 aa16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 ZNF286BP0CG31 522 aa16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 DNM1Q05193 864 aaKnown RBP16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 ITGA7Q13683 1181 aa16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 PDXDC2PQ6P474 469 aa16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 KRI1Q8N9T8 703 aaKnown RBP16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 DIS3LQ8TF46 1054 aaKnown RBP16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 ATP8B4Q8TF62 1192 aa16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 TOX2Q96NM4 488 aa16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 POLR3CQ9BUI4 534 aaPredicted RBP16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 FTOQ9C0B1 505 aaKnown RBP eCLIP16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 SENP6Q9GZR1 1112 aaPredicted RBP16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 ZSWIM4Q9H7M6 989 aa16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 TFIP11Q9UBB9 837 aaKnown RBP16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 GABBR1Q9UBS5 961 aa16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 MROH7Q68CQ1 1323 aa16.06■□□□□ 0.16
HMGXB4-204ENST00000455359 VWA3AA6NCI4 1184 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 POTEMA6NI47 508 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 ARVCFO00192 962 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 GNAT1P11488 350 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 XRCC6P12956 609 aaKnown RBP eCLIP16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 RPA1P27694 616 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 CEBPZQ03701 1054 aaKnown RBP16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 IL17AQ16552 155 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 KIAA0753Q2KHM9 967 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 KRT79Q5XKE5 535 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 SLC39A5Q6ZMH5 540 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 TRIM50Q86XT4 487 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 C4orf19Q8IY42 314 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 C7orf31Q8N865 590 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 BBXQ8WY36 941 aaPredicted RBP16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 EIF2AK1Q9BQI3 630 aaKnown RBP16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 TUFT1Q9NNX1 390 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 NRBP2Q9NSY0 501 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 FBXO2Q9UK22 296 aaPredicted RBP16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 PPME1Q9Y570 386 aa16.05■□□□□ 0.16
HMGXB4-204ENST00000455359 RRN3P2A6NIE6 340 aa16.04■□□□□ 0.16
HMGXB4-204ENST00000455359 HBP1O60381 514 aa16.04■□□□□ 0.16
HMGXB4-204ENST00000455359 SLITRK3O94933 977 aa16.04■□□□□ 0.16
HMGXB4-204ENST00000455359 CDK7P50613 346 aa16.04■□□□□ 0.16
HMGXB4-204ENST00000455359 NBPF20Q3BBV1 942 aa16.04■□□□□ 0.16
HMGXB4-204ENST00000455359 XKR3Q5GH77 459 aa16.04■□□□□ 0.16
HMGXB4-204ENST00000455359 ANKRD33Q7Z3H0 272 aa16.04■□□□□ 0.16
HMGXB4-204ENST00000455359 ZNF579Q8NAF0 562 aaKnown RBP16.04■□□□□ 0.16
HMGXB4-204ENST00000455359 HTATIP2Q9BUP3 242 aa16.04■□□□□ 0.16
HMGXB4-204ENST00000455359 GRIN2DO15399 1336 aa16.04■□□□□ 0.16
HMGXB4-204ENST00000455359 NRCAMQ92823 1304 aa16.04■□□□□ 0.16
HMGXB4-204ENST00000455359 POTEB3A0JP26 581 aa16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 CUTAO60888 179 aa16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 OATP04181 439 aa16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 NCLP19338 710 aaKnown RBP16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 MARCKSP29966 332 aaPredicted RBP16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 HOXC8P31273 242 aa16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 PSMC6P62333 389 aa16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 PLCB4Q15147 1175 aa16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 FOXD4L6Q3SYB3 417 aaPredicted RBP16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 POTEBQ6S5H4 581 aa16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 FOXD4L3Q6VB84 417 aaPredicted RBP16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 CKAP2LQ8IYA6 745 aa16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 LXNQ9BS40 222 aa16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 NIFKQ9BYG3 293 aaKnown RBP16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 RNPEPQ9H4A4 650 aa16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 GTF2IRD1Q9UHL9 959 aa16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 COL1A2P08123 1366 aa16.03■□□□□ 0.16
HMGXB4-204ENST00000455359 ZNF862O60290 1169 aa16.02■□□□□ 0.16
HMGXB4-204ENST00000455359 SPATA31C1P0DKV0 1188 aa16.02■□□□□ 0.16
HMGXB4-204ENST00000455359 SMIM10L2AP0DMW4 78 aa16.02■□□□□ 0.16
HMGXB4-204ENST00000455359 SMIM10L2BP0DMW5 78 aa16.02■□□□□ 0.16
HMGXB4-204ENST00000455359 ATP4AP20648 1035 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms