RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 HDAC9Q9UKV0 1011 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 USTQ9Y2C2 406 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 INPP5BP32019 993 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 TBX2Q13207 712 aaPredicted RBP12.23□□□□□ -0.45
DDR1-240ENST00000454612 PDCLQ13371 301 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 PPM1KQ8N3J5 372 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 JPH2Q9BR39 696 aaPredicted RBP12.23□□□□□ -0.45
DDR1-240ENST00000454612 AMNQ9BXJ7 453 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 RABGAP1Q9Y3P9 1069 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 LRRIQ3A6PVS8 624 aaPredicted RBP12.22□□□□□ -0.45
DDR1-240ENST00000454612 KRIT1O00522 736 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 FOXR1Q6PIV2 292 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 UNC13DQ70J99 1090 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 KIAA0895Q8NCT3 520 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 GIMAP8Q8ND71 665 aaPredicted RBP12.22□□□□□ -0.45
DDR1-240ENST00000454612 RAD54LQ92698 747 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 DDX47Q9H0S4 455 aaKnown RBP12.22□□□□□ -0.45
DDR1-240ENST00000454612 FBXO28Q9NVF7 368 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 FRMD4BQ9Y2L6 1034 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 MYH7P12883 1935 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 NEFHP12036 1026 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 SLCO1A2P46721 670 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 HERVK_113P62684 666 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 ARHGAP4P98171 946 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 GRB10Q13322 594 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 TNIP1Q15025 636 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 ASPRV1Q53RT3 343 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 CDC42EP5Q6NZY7 148 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 CCDC50Q8IVM0 306 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 HOOK2Q96ED9 719 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 EHD4Q9H223 541 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 CAPN11Q9UMQ6 739 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 ZBTB5O15062 677 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 DLGAP5Q15398 846 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 SLC15A2Q16348 729 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 TTI2Q6NXR4 508 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 RETREG2Q8NC44 543 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 OR2W6PQ8NHA6 318 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 AK8Q96MA6 479 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 DUSP9Q99956 384 aaKnown RBP12.22□□□□□ -0.45
DDR1-240ENST00000454612 ANKZF1Q9H8Y5 726 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 GCNT4Q9P109 453 aa12.22□□□□□ -0.45
DDR1-240ENST00000454612 PALM3A6NDB9 673 aaPredicted RBP12.21□□□□□ -0.45
DDR1-240ENST00000454612 SPOPO43791 374 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 EIF2AK2P19525 551 aaKnown RBP12.21□□□□□ -0.45
DDR1-240ENST00000454612 RPL13P26373 211 aaKnown RBP12.21□□□□□ -0.45
DDR1-240ENST00000454612 CCDC93Q567U6 631 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 RTFDC1Q9BY42 306 aaPredicted RBP12.21□□□□□ -0.45
DDR1-240ENST00000454612 RHOBTB3O94955 611 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 KRT14P02533 472 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 MYBP10242 640 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 ECE1P42892 770 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 BIRC3Q13489 604 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 MESDQ14696 234 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 NPY5RQ15761 445 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 IRF2BP1Q8IU81 584 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 ADAM33Q9BZ11 813 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 TSGA10Q9BZW7 698 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 NT5C3AQ9H0P0 336 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 CXorf56Q9H5V9 222 aa12.21□□□□□ -0.45
DDR1-240ENST00000454612 EZRP15311 586 aaKnown RBP12.21□□□□□ -0.46
DDR1-240ENST00000454612 KCNA1Q09470 495 aa12.21□□□□□ -0.46
DDR1-240ENST00000454612 SBK1Q52WX2 424 aa12.21□□□□□ -0.46
DDR1-240ENST00000454612 FAM102BQ5T8I3 360 aa12.21□□□□□ -0.46
DDR1-240ENST00000454612 OSBPL9Q96SU4 736 aa12.21□□□□□ -0.46
DDR1-240ENST00000454612 FGFBP2Q9BYJ0 223 aa12.21□□□□□ -0.46
DDR1-240ENST00000454612 CCSER1Q9C0I3 900 aa12.21□□□□□ -0.46
DDR1-240ENST00000454612 ZMYND12Q9H0C1 365 aa12.21□□□□□ -0.46
DDR1-240ENST00000454612 COL4A1P02462 1669 aa12.21□□□□□ -0.46
DDR1-240ENST00000454612 GOLGA6L7A0A1B0GV03 622 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 DDTLA6NHG4 134 aaPredicted RBP12.2□□□□□ -0.46
DDR1-240ENST00000454612 K7ENM7 598 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 ZRANB2O95218 330 aaKnown RBP eCLIP12.2□□□□□ -0.46
DDR1-240ENST00000454612 SRGNP10124 158 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 BMP3P12645 472 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 GCKP35557 465 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 STAT1P42224 750 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 CASP4P49662 377 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 CETN1Q12798 172 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 TRIP13Q15645 432 aaPredicted RBP12.2□□□□□ -0.46
DDR1-240ENST00000454612 GALNT17Q6IS24 598 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 ALKBH5Q6P6C2 394 aaKnown RBP12.2□□□□□ -0.46
DDR1-240ENST00000454612 EEPD1Q7L9B9 569 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 EIF3CLB5ME19 914 aaKnown RBP12.2□□□□□ -0.46
DDR1-240ENST00000454612 E7EVH7 732 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 PDE2AO00408 941 aaPredicted RBP12.2□□□□□ -0.46
DDR1-240ENST00000454612 PLCB3Q01970 1234 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 SNX1Q13596 522 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 KRT71Q3SY84 523 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 EIF3CQ99613 913 aaKnown RBP12.2□□□□□ -0.46
DDR1-240ENST00000454612 KCND1Q9NSA2 647 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 GEMIN8Q9NWZ8 242 aaKnown RBP12.2□□□□□ -0.46
DDR1-240ENST00000454612 ARHGAP20Q9P2F6 1191 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 GINS2Q9Y248 185 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 PDE4DIPQ5VU43 2346 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 NUP98P52948 1817 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 SBF2Q86WG5 1849 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 KLRC1P26715 233 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 ZNF543Q08ER8 600 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 SLC35G1Q2M3R5 365 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms