RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 MICAL1Q8TDZ2 1067 aa12.07□□□□□ -0.48
USP41-202ENST00000454608 GPKOWQ92917 476 aaPredicted RBP eCLIP12.07□□□□□ -0.48
USP41-202ENST00000454608 PCDHA1Q9Y5I3 950 aa12.07□□□□□ -0.48
USP41-202ENST00000454608 SPATA31C2B4DYI2 1134 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 GCOM1H8Y6P7 765 aaPredicted RBP12.06□□□□□ -0.48
USP41-202ENST00000454608 ZBTB5O15062 677 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 FIBPO43427 364 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 POLR2MP0CAP2 368 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 HOXA13P31271 388 aaPredicted RBP12.06□□□□□ -0.48
USP41-202ENST00000454608 DUSP6Q16828 381 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 UTP14CQ5TAP6 766 aaKnown RBP12.06□□□□□ -0.48
USP41-202ENST00000454608 TMEM184AQ6ZMB5 413 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 TBC1D10CQ8IV04 446 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 NKD2Q969F2 451 aaPredicted RBP12.06□□□□□ -0.48
USP41-202ENST00000454608 MTMR8Q96EF0 704 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 INPP4AQ96PE3 977 aaPredicted RBP12.06□□□□□ -0.48
USP41-202ENST00000454608 SENP7Q9BQF6 1050 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 BCAS3Q9H6U6 928 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 AAASQ9NRG9 546 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
USP41-202ENST00000454608 NR2E1Q9Y466 385 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 PCDHB12Q9Y5F1 795 aa12.06□□□□□ -0.48
USP41-202ENST00000454608 ZNF213O14771 459 aa12.05□□□□□ -0.48
USP41-202ENST00000454608 PDGFBP01127 241 aaPredicted RBP12.05□□□□□ -0.48
USP41-202ENST00000454608 MFAP1P55081 439 aaKnown RBP12.05□□□□□ -0.48
USP41-202ENST00000454608 MTMR3Q13615 1198 aa12.05□□□□□ -0.48
USP41-202ENST00000454608 IER5Q5VY09 327 aa12.05□□□□□ -0.48
USP41-202ENST00000454608 RUFY4Q6ZNE9 571 aa12.05□□□□□ -0.48
USP41-202ENST00000454608 TRIM50Q86XT4 487 aa12.05□□□□□ -0.48
USP41-202ENST00000454608 GIMAP8Q8ND71 665 aaPredicted RBP12.05□□□□□ -0.48
USP41-202ENST00000454608 RASGRP4Q8TDF6 673 aa12.05□□□□□ -0.48
USP41-202ENST00000454608 OTUD7AQ8TE49 926 aaPredicted RBP12.05□□□□□ -0.48
USP41-202ENST00000454608 FAM227BQ96M60 508 aa12.05□□□□□ -0.48
USP41-202ENST00000454608 ZSCAN10Q96SZ4 725 aaPredicted RBP12.05□□□□□ -0.48
USP41-202ENST00000454608 TUBE1Q9UJT0 475 aa12.05□□□□□ -0.48
USP41-202ENST00000454608 SORCS3Q9UPU3 1222 aa12.05□□□□□ -0.48
USP41-202ENST00000454608 CDY2AQ9Y6F7 541 aa12.05□□□□□ -0.48
USP41-202ENST00000454608 NEDD4P46934 1319 aa12.05□□□□□ -0.48
USP41-202ENST00000454608 FRMPD4Q14CM0 1322 aa12.05□□□□□ -0.48
USP41-202ENST00000454608 A0A0D9SFI3 127 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 MBLAC1A4D2B0 266 aaPredicted RBP12.04□□□□□ -0.48
USP41-202ENST00000454608 KLRF2D3W0D1 207 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 PER2O15055 1255 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 SCG2P13521 617 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 HOXB8P17481 243 aaPredicted RBP12.04□□□□□ -0.48
USP41-202ENST00000454608 MRPS6P82932 125 aaKnown RBP12.04□□□□□ -0.48
USP41-202ENST00000454608 MRPS9P82933 396 aaKnown RBP12.04□□□□□ -0.48
USP41-202ENST00000454608 PPFIA1Q13136 1202 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 PAN2Q504Q3 1202 aaKnown RBP12.04□□□□□ -0.48
USP41-202ENST00000454608 ANKRD54Q6NXT1 300 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 RTN4RL1Q86UN2 441 aaPredicted RBP12.04□□□□□ -0.48
USP41-202ENST00000454608 FCHSD1Q86WN1 690 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 ENAHQ8N8S7 591 aaPredicted RBP12.04□□□□□ -0.48
USP41-202ENST00000454608 KREMEN2Q8NCW0 462 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 DNAJB3Q8WWF6 145 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 LINC01599Q8WXQ3 324 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 ZFP91Q96JP5 570 aaPredicted RBP12.04□□□□□ -0.48
USP41-202ENST00000454608 S1PR5Q9H228 398 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 AGO3Q9H9G7 860 aaKnown RBP12.04□□□□□ -0.48
USP41-202ENST00000454608 ERAP1Q9NZ08 941 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 LRFN2Q9ULH4 789 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 SALL3Q9BXA9 1300 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 DCHS1Q96JQ0 3298 aa12.04□□□□□ -0.48
USP41-202ENST00000454608 M0QZ92 97 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 PPP1R11O60927 126 aaPredicted RBP12.03□□□□□ -0.48
USP41-202ENST00000454608 PPFIA3O75145 1194 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 CD52P31358 61 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 TECP42680 631 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 CLCN5P51795 746 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 SEMA3FQ13275 785 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 KCNC3Q14003 757 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 GRIK4Q16099 956 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 SPOUT1Q5T280 376 aaKnown RBP12.03□□□□□ -0.48
USP41-202ENST00000454608 ASTLQ6HA08 431 aaPredicted RBP12.03□□□□□ -0.48
USP41-202ENST00000454608 XRRA1Q6P2D8 792 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 ZNF589Q86UQ0 364 aaPredicted RBP12.03□□□□□ -0.48
USP41-202ENST00000454608 ADSSL1Q8N142 457 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 TMEM105Q8N8V8 129 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 VN1R2Q8NFZ6 395 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 TNPO1Q92973 898 aaKnown RBP12.03□□□□□ -0.48
USP41-202ENST00000454608 NECTIN4Q96NY8 510 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 ZBTB47Q9UFB7 747 aaPredicted RBP12.03□□□□□ -0.48
USP41-202ENST00000454608 LZTS1Q9Y250 596 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 SUPT16HQ9Y5B9 1047 aaKnown RBP12.03□□□□□ -0.48
USP41-202ENST00000454608 PCDHGC5Q9Y5F6 944 aa12.03□□□□□ -0.48
USP41-202ENST00000454608 BAZ2BQ9UIF8 2168 aaKnown RBP12.03□□□□□ -0.48
USP41-202ENST00000454608 GVINP1Q7Z2Y8 2422 aa12.02□□□□□ -0.48
USP41-202ENST00000454608 RRN3P2A6NIE6 340 aa12.02□□□□□ -0.49
USP41-202ENST00000454608 FSCN2O14926 492 aa12.02□□□□□ -0.49
USP41-202ENST00000454608 FGF18O76093 207 aa12.02□□□□□ -0.49
USP41-202ENST00000454608 TCF7P36402 384 aaPredicted RBP12.02□□□□□ -0.49
USP41-202ENST00000454608 PAK2Q13177 524 aa12.02□□□□□ -0.49
USP41-202ENST00000454608 C20orf194Q5TEA3 1177 aa12.02□□□□□ -0.49
USP41-202ENST00000454608 FRMD5Q7Z6J6 570 aa12.02□□□□□ -0.49
USP41-202ENST00000454608 NLRX1Q86UT6 975 aa12.02□□□□□ -0.49
USP41-202ENST00000454608 STAG2Q8N3U4 1231 aa12.02□□□□□ -0.49
USP41-202ENST00000454608 ZSWIM5Q9P217 1185 aa12.02□□□□□ -0.49
USP41-202ENST00000454608 RCAN3Q9UKA8 241 aa12.02□□□□□ -0.49
USP41-202ENST00000454608 PADI3Q9ULW8 664 aa12.02□□□□□ -0.49
USP41-202ENST00000454608 PCDHB7Q9Y5E2 793 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms