RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 PIK3AP1Q6ZUJ8 805 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 C16orf59Q7L2K0 433 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 CAGE1Q8TC20 777 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 IL23AQ9NPF7 189 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.24
VPS16-205ENST00000453689 ARID2Q68CP9 1835 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 IGKV6D-21A0A0A0MT36 114 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 BTBD18B2RXH4 712 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 SOX1O00570 391 aaPredicted RBP16.57■□□□□ 0.24
VPS16-205ENST00000453689 TREHO43280 583 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 ACRP10323 421 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 SYT1P21579 422 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 RBL2Q08999 1139 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 LETM2Q2VYF4 491 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 LRIT3Q3SXY7 679 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 ZNF746Q6NUN9 644 aaPredicted RBP16.57■□□□□ 0.24
VPS16-205ENST00000453689 NEK8Q86SG6 692 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 CCDC155Q8N6L0 562 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 RETREG2Q8NC44 543 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 LMBR1Q8WVP7 490 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 SLC5A5Q92911 643 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 ATP6V0A1Q93050 837 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 WNT8BQ93098 351 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.57■□□□□ 0.244e-6■□□□□ 8
VPS16-205ENST00000453689 FOXP1Q9H334 677 aaPredicted RBP16.57■□□□□ 0.24
VPS16-205ENST00000453689 AZI2Q9H6S1 392 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 SETD4Q9NVD3 440 aa16.57■□□□□ 0.24
VPS16-205ENST00000453689 VPS37CA5D8V6 355 aaPredicted RBP16.56■□□□□ 0.24
VPS16-205ENST00000453689 SLC37A4O43826 429 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 IQCF3P0C7M6 154 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 GNAT1P11488 350 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 CKBP12277 381 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 PDIA4P13667 645 aaKnown RBP16.56■□□□□ 0.24
VPS16-205ENST00000453689 STAT5BP51692 787 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 ADAM17P78536 824 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 KRT76Q01546 638 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 GNL2Q13823 731 aaKnown RBP16.56■□□□□ 0.24
VPS16-205ENST00000453689 TRIM71Q2Q1W2 868 aaKnown RBP16.56■□□□□ 0.24
VPS16-205ENST00000453689 TMEM240Q5SV17 173 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 PLPPR4Q7Z2D5 763 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 SERINC5Q86VE9 423 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 CCDC60Q8IWA6 550 aaPredicted RBP16.56■□□□□ 0.24
VPS16-205ENST00000453689 AFAP1L1Q8TED9 768 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 GJA10Q969M2 543 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 VWCEQ96DN2 955 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 RIT2Q99578 217 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 DDX25Q9UHL0 483 aaKnown RBP16.56■□□□□ 0.24
VPS16-205ENST00000453689 TCEAL9Q9UHQ7 104 aa16.56■□□□□ 0.24
VPS16-205ENST00000453689 NRCAMQ92823 1304 aa16.55■□□□□ 0.24
VPS16-205ENST00000453689 STX6O43752 255 aa16.55■□□□□ 0.24
VPS16-205ENST00000453689 GAS7O60861 476 aa16.55■□□□□ 0.24
VPS16-205ENST00000453689 GCFC2P16383 781 aaKnown RBP16.55■□□□□ 0.24
VPS16-205ENST00000453689 PPFIA1Q13136 1202 aa16.55■□□□□ 0.24
VPS16-205ENST00000453689 PLCB4Q15147 1175 aa16.55■□□□□ 0.24
VPS16-205ENST00000453689 LRCH2Q5VUJ6 765 aa16.55■□□□□ 0.24
VPS16-205ENST00000453689 PPP4R3AQ6IN85 833 aa16.55■□□□□ 0.24
VPS16-205ENST00000453689 MIS18BP1Q6P0N0 1132 aa16.55■□□□□ 0.24
VPS16-205ENST00000453689 PSRC1Q6PGN9 363 aaPredicted RBP16.55■□□□□ 0.24
VPS16-205ENST00000453689 ZNF365Q70YC5 407 aa16.55■□□□□ 0.24
VPS16-205ENST00000453689 LRRC8DQ7L1W4 858 aa16.55■□□□□ 0.24
VPS16-205ENST00000453689 SMAP1Q8IYB5 467 aaPredicted RBP16.55■□□□□ 0.24
VPS16-205ENST00000453689 ETNPPLQ8TBG4 499 aa16.55■□□□□ 0.24
VPS16-205ENST00000453689 RNPC3Q96LT9 517 aaKnown RBP16.55■□□□□ 0.24
VPS16-205ENST00000453689 TEKT3Q9BXF9 490 aa16.55■□□□□ 0.24
VPS16-205ENST00000453689 BACH1O14867 736 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 CCNT1O60563 726 aaKnown RBP16.54■□□□□ 0.24
VPS16-205ENST00000453689 PSMD10O75832 226 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 SELPP16109 830 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 U2AF2P26368 475 aaKnown RBP eCLIP16.54■□□□□ 0.24
VPS16-205ENST00000453689 RFC2P35250 354 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 SLC26A2P50443 739 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 GRIK4Q16099 956 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 ZNF618Q5T7W0 954 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 FAM160B1Q5W0V3 765 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 MCTP1Q6DN14 999 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 SWSAP1Q6NVH7 229 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 DEFB128Q7Z7B8 93 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 NOSTRINQ8IVI9 506 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 RPUSD2Q8IZ73 545 aaKnown RBP16.54■□□□□ 0.24
VPS16-205ENST00000453689 LRCH3Q96II8 777 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 NAP1L4Q99733 375 aaKnown RBP16.54■□□□□ 0.24
VPS16-205ENST00000453689 UNC45AQ9H3U1 944 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 ZNF302Q9NR11 478 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 MTMR6Q9Y217 621 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 SAMM50Q9Y512 469 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 PCDHA10Q9Y5I2 948 aa16.54■□□□□ 0.24
VPS16-205ENST00000453689 LAMA3Q16787 3333 aa16.53■□□□□ 0.24
VPS16-205ENST00000453689 POTEB3A0JP26 581 aa16.53■□□□□ 0.24
VPS16-205ENST00000453689 WDR64B1ANS9 1081 aa16.53■□□□□ 0.24
VPS16-205ENST00000453689 KIF28PB7ZC32 967 aa16.53■□□□□ 0.24
VPS16-205ENST00000453689 PSAPP07602 524 aa16.53■□□□□ 0.24
VPS16-205ENST00000453689 INSRRP14616 1297 aa16.53■□□□□ 0.24
VPS16-205ENST00000453689 MARCH8Q5T0T0 291 aa16.53■□□□□ 0.24
VPS16-205ENST00000453689 PDXDC2PQ6P474 469 aa16.53■□□□□ 0.24
VPS16-205ENST00000453689 POTEBQ6S5H4 581 aa16.53■□□□□ 0.24
VPS16-205ENST00000453689 KCNMB3Q9NPA1 279 aa16.53■□□□□ 0.24
VPS16-205ENST00000453689 TRPC6Q9Y210 931 aa16.53■□□□□ 0.24
VPS16-205ENST00000453689 IGSF9BQ9UPX0 1349 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 MBLAC1A4D2B0 266 aaPredicted RBP16.52■□□□□ 0.24
VPS16-205ENST00000453689 CHMP2AO43633 222 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms