RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 RAB34Q9BZG1 259 aa16.44■□□□□ 0.22
NCKIPSD-207ENST00000453349 VAV3Q9UKW4 847 aa16.44■□□□□ 0.22
NCKIPSD-207ENST00000453349 RBM19Q9Y4C8 960 aaKnown RBP16.44■□□□□ 0.22
NCKIPSD-207ENST00000453349 GRIN2DO15399 1336 aa16.44■□□□□ 0.22
NCKIPSD-207ENST00000453349 DKC1O60832 514 aaKnown RBP eCLIP16.43■□□□□ 0.221e-6■■□□□ 12.2
NCKIPSD-207ENST00000453349 P4HBP07237 508 aaKnown RBP16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 GNAT1P11488 350 aa16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 MARK3P27448 753 aa16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 MLLT1Q03111 559 aaPredicted RBP16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 PKP1Q13835 747 aa16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 SF3A1Q15459 793 aaKnown RBP16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 FAM173BQ6P4H8 233 aa16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 ANKRD33Q7Z3H0 272 aa16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 TRIM50Q86XT4 487 aa16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 TOX2Q96NM4 488 aa16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 RNPEPQ9H4A4 650 aa16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 TSHZ2Q9NRE2 1034 aa16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 HDAC6Q9UBN7 1215 aa16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 MAFBQ9Y5Q3 323 aaPredicted RBP16.43■□□□□ 0.22
NCKIPSD-207ENST00000453349 POTEB3A0JP26 581 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 EML1O00423 815 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 PQBP1O60828 265 aaKnown RBP16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 BRD1O95696 1058 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 NUCB2P80303 420 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 ATP2C1P98194 919 aaPredicted RBP16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 PDIA5Q14554 519 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 ARL6IP4Q66PJ3 421 aaKnown RBP16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 POTEBQ6S5H4 581 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 SESTD1Q86VW0 696 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 CCDC60Q8IWA6 550 aaPredicted RBP16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 PPP1R13LQ8WUF5 828 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 ATP6V0A1Q93050 837 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 NRBP2Q9NSY0 501 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 TRPC6Q9Y210 931 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 CLIC4Q9Y696 253 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 STK24Q9Y6E0 443 aa16.42■□□□□ 0.22
NCKIPSD-207ENST00000453349 C17orf102A2RUQ5 167 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 HBP1O60381 514 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 SMIM10L2AP0DMW4 78 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 SMIM10L2BP0DMW5 78 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 FXR2P51116 673 aaKnown RBP eCLIP16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 PSMC5P62195 406 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 CEBPZQ03701 1054 aaKnown RBP16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 TLE2Q04725 743 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 SPIRE1Q08AE8 756 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 PLCB4Q15147 1175 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 ATL3Q6DD88 541 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 ERMNQ8TAM6 284 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 BBXQ8WY36 941 aaPredicted RBP16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 LRWD1Q9UFC0 647 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 GTF2IRD1Q9UHL9 959 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 NOD1Q9Y239 953 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 ATP6V1DQ9Y5K8 247 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 NR2E3Q9Y5X4 410 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 NRCAMQ92823 1304 aa16.41■□□□□ 0.22
NCKIPSD-207ENST00000453349 RRN3P2A6NIE6 340 aa16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 QARSP47897 775 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 PTGISQ16647 500 aa16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 FOXD4L6Q3SYB3 417 aaPredicted RBP16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 GDF6Q6KF10 455 aaPredicted RBP16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 FOXD4L3Q6VB84 417 aaPredicted RBP16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 TRMT1LQ7Z2T5 733 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 FAM126BQ8IXS8 530 aa16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 C7orf61Q8IZ16 206 aa16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 BANK1Q8NDB2 785 aa16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 NEK9Q8TD19 979 aa16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 DYDC2Q96IM9 177 aa16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 FAM167AQ96KS9 214 aa16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 EIF2AK1Q9BQI3 630 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 TFIP11Q9UBB9 837 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 PRKAG2Q9UGJ0 569 aa16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 CFAP45Q9UL16 551 aa16.4■□□□□ 0.22
NCKIPSD-207ENST00000453349 VWA3AA6NCI4 1184 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 POTEMA6NI47 508 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 B4GALT4O60513 344 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 CD4P01730 458 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 CLTBP09497 229 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 INSRRP14616 1297 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 ATP4AP20648 1035 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 FAAP100Q0VG06 881 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 ZNF484Q5JVG2 852 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 TPH2Q8IWU9 490 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 ATP8B4Q8TF62 1192 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 USP28Q96RU2 1077 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 TRPV6Q9H1D0 765 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 ZSWIM4Q9H7M6 989 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 TMEM39AQ9NV64 488 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 SETD4Q9NVD3 440 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 ZDHHC9Q9Y397 364 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 IGSF9BQ9UPX0 1349 aa16.39■□□□□ 0.21
NCKIPSD-207ENST00000453349 DDX11L8A8MPP1 907 aa16.38■□□□□ 0.21
NCKIPSD-207ENST00000453349 SLITRK3O94933 977 aa16.38■□□□□ 0.21
NCKIPSD-207ENST00000453349 OATP04181 439 aa16.38■□□□□ 0.21
NCKIPSD-207ENST00000453349 IGBP1P78318 339 aa16.38■□□□□ 0.21
NCKIPSD-207ENST00000453349 PPFIA1Q13136 1202 aa16.38■□□□□ 0.21
NCKIPSD-207ENST00000453349 CTTNQ14247 550 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-207ENST00000453349 SLC39A14Q15043 492 aa16.38■□□□□ 0.21
NCKIPSD-207ENST00000453349 STK38Q15208 465 aa16.38■□□□□ 0.21
NCKIPSD-207ENST00000453349 PTPAQ15257 358 aa16.38■□□□□ 0.21
NCKIPSD-207ENST00000453349 GRIK4Q16099 956 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms