RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 MYCP01106 439 aaPredicted RBP13.02□□□□□ -0.33
SCN9A-204ENST00000452182 SUPT20HL2P0C7V6 817 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 TCF7P36402 384 aaPredicted RBP13.02□□□□□ -0.33
SCN9A-204ENST00000452182 SP4Q02446 784 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 LRRC41Q15345 812 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 CSPP1Q1MSJ5 1256 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 GNASQ5JWF2 1037 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 COL13A1Q5TAT6 717 aaPredicted RBP13.02□□□□□ -0.33
SCN9A-204ENST00000452182 NCAPH2Q6IBW4 605 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 PCSK9Q8NBP7 692 aaKnown RBP13.02□□□□□ -0.33
SCN9A-204ENST00000452182 NEK9Q8TD19 979 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 AFAP1L1Q8TED9 768 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 U2AF1L4Q8WU68 220 aaKnown RBP13.02□□□□□ -0.33
SCN9A-204ENST00000452182 HSD17B14Q9BPX1 270 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 TELO2Q9Y4R8 837 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 MYADML2A6NDP7 307 aa13.01□□□□□ -0.33
SCN9A-204ENST00000452182 MOXD2PA6NHM9 499 aa13.01□□□□□ -0.33
SCN9A-204ENST00000452182 SLC26A4O43511 780 aa13.01□□□□□ -0.33
SCN9A-204ENST00000452182 CUTAO60888 179 aa13.01□□□□□ -0.33
SCN9A-204ENST00000452182 P4HBP07237 508 aaKnown RBP13.01□□□□□ -0.33
SCN9A-204ENST00000452182 ME1P48163 572 aa13.01□□□□□ -0.33
SCN9A-204ENST00000452182 SLC26A2P50443 739 aa13.01□□□□□ -0.33
SCN9A-204ENST00000452182 GRIN1Q05586 938 aa13.01□□□□□ -0.33
SCN9A-204ENST00000452182 PDAP1Q13442 181 aaKnown RBP13.01□□□□□ -0.33
SCN9A-204ENST00000452182 AXDND1Q5T1B0 1012 aaPredicted RBP13.01□□□□□ -0.33
SCN9A-204ENST00000452182 HAUS3Q68CZ6 603 aa13.01□□□□□ -0.33
SCN9A-204ENST00000452182 PLPPR4Q7Z2D5 763 aa13.01□□□□□ -0.33
SCN9A-204ENST00000452182 ERMNQ8TAM6 284 aa13.01□□□□□ -0.33
SCN9A-204ENST00000452182 CSRNP2Q9H175 543 aa13.01□□□□□ -0.33
SCN9A-204ENST00000452182 PCDHA7Q9UN72 937 aa13.01□□□□□ -0.33
SCN9A-204ENST00000452182 MAFBQ9Y5Q3 323 aaPredicted RBP13.01□□□□□ -0.33
SCN9A-204ENST00000452182 MYH9P35579 1960 aaKnown RBP13□□□□□ -0.33
SCN9A-204ENST00000452182 IGSF9BQ9UPX0 1349 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 DNM1LO00429 736 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 LGALS2P05162 132 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 MUTP22033 750 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 RPA1P27694 616 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 STAT5BP51692 787 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 IRX5P78411 483 aaPredicted RBP13□□□□□ -0.33
SCN9A-204ENST00000452182 PURAQ00577 322 aaKnown RBP13□□□□□ -0.33
SCN9A-204ENST00000452182 BEX3Q00994 111 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 KRT79Q5XKE5 535 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 ADALQ6DHV7 355 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 CCDC60Q8IWA6 550 aaPredicted RBP13□□□□□ -0.33
SCN9A-204ENST00000452182 KCTD17Q8N5Z5 321 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 ANKLE1Q8NAG6 615 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 TMEM87AQ8NBN3 555 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 CLIC6Q96NY7 704 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 PCYT2Q99447 389 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 EIF2AK1Q9BQI3 630 aaKnown RBP13□□□□□ -0.33
SCN9A-204ENST00000452182 C16orf70Q9BSU1 422 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 POLR3CQ9BUI4 534 aaPredicted RBP13□□□□□ -0.33
SCN9A-204ENST00000452182 SMARCAD1Q9H4L7 1026 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 AZI2Q9H6S1 392 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 TUFT1Q9NNX1 390 aa13□□□□□ -0.33
SCN9A-204ENST00000452182 DKC1O60832 514 aaKnown RBP eCLIP12.99□□□□□ -0.33
SCN9A-204ENST00000452182 CABYRO75952 493 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 SLITRK3O94933 977 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 LYPLA2O95372 231 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 F2P00734 622 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 QARSP47897 775 aaKnown RBP12.99□□□□□ -0.33
SCN9A-204ENST00000452182 PSMC5P62195 406 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 KCNA10Q16322 511 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 HYIQ5T013 277 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 FAM160B1Q5W0V3 765 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 SWSAP1Q6NVH7 229 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 ATP6V0A1Q93050 837 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 GBP4Q96PP9 640 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 MMTAG2Q9BU76 263 aaKnown RBP12.99□□□□□ -0.33
SCN9A-204ENST00000452182 CCSER1Q9C0I3 900 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 GDPD2Q9HCC8 539 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 ZNF302Q9NR11 478 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 ERAP1Q9NZ08 941 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 ZNF215Q9UL58 517 aaPredicted RBP12.99□□□□□ -0.33
SCN9A-204ENST00000452182 SCN10AQ9Y5Y9 1956 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 A0A1W2PQ27 194 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 A0A1W2PQ64 194 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 A0A1W2PQD8 194 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 KBTBD13C9JR72 458 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 BACH1O14867 736 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 TFRCP02786 760 aaKnown RBP12.99□□□□□ -0.33
SCN9A-204ENST00000452182 ASGR1P07306 291 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 SPATA31C1P0DKV0 1188 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 UBA7P41226 1012 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 CATSPER3Q86XQ3 398 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 C4orf19Q8IY42 314 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 KAT2BQ92831 832 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 LXNQ9BS40 222 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 MTG1Q9BT17 334 aaPredicted RBP12.99□□□□□ -0.33
SCN9A-204ENST00000452182 KATNAL1Q9BW62 490 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 ZSWIM4Q9H7M6 989 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 GABBR1Q9UBS5 961 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 PHF24Q9UPV7 400 aa12.99□□□□□ -0.33
SCN9A-204ENST00000452182 KDM3AQ9Y4C1 1321 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 PP2D1A8MPX8 630 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 H3BRB1 525 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 HAS3O00219 553 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms