RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 COL9A2Q14055 689 aaPredicted RBP7.35□□□□□ -1.23
KARSP1-201ENST00000451871 WDR43Q15061 677 aaKnown RBP eCLIP7.35□□□□□ -1.23
KARSP1-201ENST00000451871 LRRC41Q15345 812 aa7.35□□□□□ -1.23
KARSP1-201ENST00000451871 TMEM240Q5SV17 173 aa7.35□□□□□ -1.23
KARSP1-201ENST00000451871 RASIP1Q5U651 963 aa7.35□□□□□ -1.23
KARSP1-201ENST00000451871 TTBK2Q6IQ55 1244 aa7.35□□□□□ -1.23
KARSP1-201ENST00000451871 BNC2Q6ZN30 1099 aaPredicted RBP7.35□□□□□ -1.23
KARSP1-201ENST00000451871 RPUSD2Q8IZ73 545 aaKnown RBP7.35□□□□□ -1.23
KARSP1-201ENST00000451871 HERVK_113Q902F9 699 aa7.35□□□□□ -1.23
KARSP1-201ENST00000451871 KAZALD1Q96I82 304 aa7.35□□□□□ -1.23
KARSP1-201ENST00000451871 SPC25Q9HBM1 224 aa7.35□□□□□ -1.23
KARSP1-201ENST00000451871 DNAJB12Q9NXW2 375 aaKnown RBP7.35□□□□□ -1.23
KARSP1-201ENST00000451871 C9orf78Q9NZ63 289 aaPredicted RBP7.35□□□□□ -1.23
KARSP1-201ENST00000451871 NXF1Q9UBU9 619 aaKnown RBP7.35□□□□□ -1.23
KARSP1-201ENST00000451871 ZFHX2Q9C0A1 2572 aaPredicted RBP7.35□□□□□ -1.23
KARSP1-201ENST00000451871 A0A0G2JMZ2 1700 aa7.35□□□□□ -1.23
KARSP1-201ENST00000451871 C19orf81C9J6K1 198 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 APAF1O14727 1248 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 SEPT4O43236 478 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 PQBP1O60828 265 aaKnown RBP7.34□□□□□ -1.23
KARSP1-201ENST00000451871 MX2P20592 715 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 LMNB2Q03252 620 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 TBC1D8BQ0IIM8 1120 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 PUM3Q15397 648 aaKnown RBP7.34□□□□□ -1.23
KARSP1-201ENST00000451871 SPRED3Q2MJR0 410 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 WDR78Q5VTH9 848 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 KANK3Q6NY19 840 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 C16orf59Q7L2K0 433 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 MICALL1Q8N3F8 863 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 TSR2Q969E8 191 aaKnown RBP7.34□□□□□ -1.23
KARSP1-201ENST00000451871 SUCLG2Q96I99 432 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 RASSF4Q9H2L5 321 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 SLC28A3Q9HAS3 691 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 MSRAQ9UJ68 235 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 MSRB2Q9Y3D2 182 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 RABGAP1Q9Y3P9 1069 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 GAKO14976 1311 aa7.34□□□□□ -1.23
KARSP1-201ENST00000451871 SIN3BO75182 1162 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 CNMDO75829 334 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 PARNO95453 639 aaKnown RBP7.33□□□□□ -1.24
KARSP1-201ENST00000451871 F13A1P00488 732 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 TIMP1P01033 207 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 CCNA1P78396 465 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 FAAP100Q0VG06 881 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 SEPT6Q14141 434 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 GRB14Q14449 540 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 RAB30Q15771 203 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 FBXW10Q5XX13 1052 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 ADAMTSL4Q6UY14 1074 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 SLITRK4Q8IW52 837 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 SLC44A5Q8NCS7 719 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 BRINP2Q9C0B6 783 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 NKX2-4Q9H2Z4 354 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 SALL1Q9NSC2 1324 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 ANKRD11Q6UB99 2663 aaPredicted RBP7.33□□□□□ -1.24
KARSP1-201ENST00000451871 CDK5RAP2Q96SN8 1893 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 FAM186AA6NE01 2351 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 SLC5A1P13866 664 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 BTDP43251 543 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 RALBP1Q15311 655 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 MFSD5Q6N075 450 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 CCDC174Q6PII3 467 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 AGMOQ6ZNB7 445 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 SETXQ7Z333 2677 aaKnown RBP7.33□□□□□ -1.24
KARSP1-201ENST00000451871 ZFHX4Q86UP3 3567 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 TNFRSF25Q93038 417 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 NXPE3Q969Y0 559 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 TOX2Q96NM4 488 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 ANP32EQ9BTT0 268 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 METTL14Q9HCE5 456 aaKnown RBP7.33□□□□□ -1.24
KARSP1-201ENST00000451871 NAGPAQ9UK23 515 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 PCDHB5Q9Y5E4 795 aa7.33□□□□□ -1.24
KARSP1-201ENST00000451871 CFAP47Q6ZTR5 3102 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 DCDC2CA8MYV0 355 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 ASNSP08243 561 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 MCM4P33991 863 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 RHBDL3P58872 404 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 AMPD3Q01432 767 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 PPIGQ13427 754 aaKnown RBP eCLIP7.32□□□□□ -1.24
KARSP1-201ENST00000451871 DDR2Q16832 855 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 FAM47AQ5JRC9 791 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 PRAMEF19Q5SWL8 479 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 OLFML2BQ68BL8 750 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 ZNF365Q70YC5 407 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 ANKRD33Q7Z3H0 272 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 DPP9Q86TI2 863 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 KLHDC4Q8TBB5 520 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 LPIN2Q92539 896 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 MDFIQ99750 246 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 BHLHE41Q9C0J9 482 aaPredicted RBP7.32□□□□□ -1.24
KARSP1-201ENST00000451871 CD320Q9NPF0 282 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 COG5Q9UP83 839 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 YBX2Q9Y2T7 364 aaKnown RBP7.32□□□□□ -1.24
KARSP1-201ENST00000451871 PLXNA3P51805 1871 aa7.32□□□□□ -1.24
KARSP1-201ENST00000451871 ACRP10323 421 aa7.31□□□□□ -1.24
KARSP1-201ENST00000451871 CPB1P15086 417 aa7.31□□□□□ -1.24
KARSP1-201ENST00000451871 JAG1P78504 1218 aa7.31□□□□□ -1.24
KARSP1-201ENST00000451871 RABL6Q3YEC7 729 aaPredicted RBP7.31□□□□□ -1.24
KARSP1-201ENST00000451871 FCHSD1Q86WN1 690 aa7.31□□□□□ -1.24
KARSP1-201ENST00000451871 TMEM102Q8N9M5 508 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms