RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 FOSBP53539 338 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 AK2P54819 239 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 SCRN1Q12765 414 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 PRR16Q569H4 304 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 CPLX2Q6PUV4 134 aaKnown RBP11.01□□□□□ -0.65
USP54-207ENST00000451492 HERC6Q8IVU3 1022 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 BICD2Q8TD16 824 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 ZNF274Q96GC6 653 aaPredicted RBP11.01□□□□□ -0.65
USP54-207ENST00000451492 PCYT2Q99447 389 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 ZNF577Q9BSK1 485 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 OSBPL7Q9BZF2 842 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 FAM49AQ9H0Q0 323 aaPredicted RBP11.01□□□□□ -0.65
USP54-207ENST00000451492 SMARCAD1Q9H4L7 1026 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 TUBE1Q9UJT0 475 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 PCDHA11Q9Y5I1 949 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 NFASCO94856 1347 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 MYO9BQ13459 2157 aa11□□□□□ -0.65
USP54-207ENST00000451492 TRANK1O15050 2925 aa11□□□□□ -0.65
USP54-207ENST00000451492 IGLV3-22A0A075B6J6 115 aa11□□□□□ -0.65
USP54-207ENST00000451492 MEIS1O00470 390 aa11□□□□□ -0.65
USP54-207ENST00000451492 CHMP2AO43633 222 aa11□□□□□ -0.65
USP54-207ENST00000451492 LGR5O75473 907 aa11□□□□□ -0.65
USP54-207ENST00000451492 ARHGEF15O94989 841 aa11□□□□□ -0.65
USP54-207ENST00000451492 DEXIO95424 95 aa11□□□□□ -0.65
USP54-207ENST00000451492 LARGE1O95461 756 aa11□□□□□ -0.65
USP54-207ENST00000451492 SEC24BO95487 1268 aa11□□□□□ -0.65
USP54-207ENST00000451492 CXCL10P02778 98 aa11□□□□□ -0.65
USP54-207ENST00000451492 EVCP57679 992 aa11□□□□□ -0.65
USP54-207ENST00000451492 SETQ01105 290 aaPredicted RBP11□□□□□ -0.65
USP54-207ENST00000451492 TMEM62Q0P6H9 643 aa11□□□□□ -0.65
USP54-207ENST00000451492 IKBKEQ14164 716 aa11□□□□□ -0.65
USP54-207ENST00000451492 CCDC85BQ15834 202 aaPredicted RBP11□□□□□ -0.65
USP54-207ENST00000451492 SPRED2Q7Z698 418 aa11□□□□□ -0.65
USP54-207ENST00000451492 MYOCDQ8IZQ8 938 aa11□□□□□ -0.65
USP54-207ENST00000451492 DBF4BQ8NFT6 615 aa11□□□□□ -0.65
USP54-207ENST00000451492 DNAJB3Q8WWF6 145 aa11□□□□□ -0.65
USP54-207ENST00000451492 SLKQ9H2G2 1235 aaPredicted RBP11□□□□□ -0.65
USP54-207ENST00000451492 TPCN1Q9ULQ1 816 aa11□□□□□ -0.65
USP54-207ENST00000451492 KCNJ14Q9UNX9 436 aa11□□□□□ -0.65
USP54-207ENST00000451492 NRCAMQ92823 1304 aa11□□□□□ -0.65
USP54-207ENST00000451492 LCHNA4D1U4 455 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 RFXAPO00287 272 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 IPO5O00410 1097 aaKnown RBP10.99□□□□□ -0.65
USP54-207ENST00000451492 PARNO95453 639 aaKnown RBP10.99□□□□□ -0.65
USP54-207ENST00000451492 CCNE2O96020 404 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 CYP3A4P08684 503 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 GHRP10912 638 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 INSRRP14616 1297 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 IBSPP21815 317 aaPredicted RBP10.99□□□□□ -0.65
USP54-207ENST00000451492 STAT5BP51692 787 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 ADAM17P78536 824 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 PLCB4Q15147 1175 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP54-207ENST00000451492 CCDC60Q8IWA6 550 aaPredicted RBP10.99□□□□□ -0.65
USP54-207ENST00000451492 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP54-207ENST00000451492 CKAP2LQ8IYA6 745 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 NECAB1Q8N987 351 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 USP38Q8NB14 1042 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 TBCKQ8TEA7 893 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 ARNTL2Q8WYA1 636 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 GJA10Q969M2 543 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 PPP1R16BQ96T49 567 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 GJB4Q9NTQ9 266 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 MTUS1Q9ULD2 1270 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 SAMM50Q9Y512 469 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 RALGAPA2Q2PPJ7 1873 aa10.99□□□□□ -0.65
USP54-207ENST00000451492 ARID2Q68CP9 1835 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 ATG2AQ2TAZ0 1938 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 POTEB3A0JP26 581 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 EPOPA6NHQ4 379 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 KIF28PB7ZC32 967 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 CDKL5O76039 1030 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 UPP2O95045 317 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 TDP2O95551 362 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 ANAPC15P60006 121 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 ADGRE1Q14246 886 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 MARCH8Q5T0T0 291 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 FAM160B1Q5W0V3 765 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 MCTP2Q6DN12 878 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 SWSAP1Q6NVH7 229 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 PDXDC2PQ6P474 469 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 POTEBQ6S5H4 581 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 NIPA1Q7RTP0 329 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 RSPH3Q86UC2 560 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 BLIDQ8IZY5 108 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 CRYGNQ8WXF5 182 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 SEPT8Q92599 483 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 IFIH1Q9BYX4 1025 aaKnown RBP10.98□□□□□ -0.65
USP54-207ENST00000451492 PRDM6Q9NQX0 595 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 ZNF302Q9NR11 478 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 SH3GLB2Q9NR46 395 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 PCDHA4Q9UN74 947 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 CDY2AQ9Y6F7 541 aa10.98□□□□□ -0.65
USP54-207ENST00000451492 ABHD14A-ACY1A0A1B0GW23 586 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 MSH4O15457 936 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 DHX15O43143 795 aaKnown RBP10.97□□□□□ -0.65
USP54-207ENST00000451492 PFKFB2O60825 505 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 CAND2O75155 1236 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 CHRNA1P02708 482 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 AMHP03971 560 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms