RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 ZBED2Q9BTP6 218 aa18.24■□□□□ 0.51
SGCE-208ENST00000450385 IGKV6D-21A0A0A0MT36 114 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 IPO5O00410 1097 aaKnown RBP18.23■□□□□ 0.51
SGCE-208ENST00000450385 CDKL5O76039 1030 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 GJB5O95377 273 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 DEXIO95424 95 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 ARP10275 920 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 STAT5BP51692 787 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 MBTPS1Q14703 1052 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 GRIK4Q16099 956 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 FAM160B1Q5W0V3 765 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 TRIM50Q86XT4 487 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 USP38Q8NB14 1042 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 IL17RAQ96F46 866 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 SLC26A6Q9BXS9 759 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 PRDM12Q9H4Q4 367 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 PDRG1Q9NUG6 133 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 TUBE1Q9UJT0 475 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 INSL6Q9Y581 213 aa18.23■□□□□ 0.51
SGCE-208ENST00000450385 PTPRSQ13332 1948 aa18.22■□□□□ 0.51
SGCE-208ENST00000450385 IGLV3-22A0A075B6J6 115 aa18.22■□□□□ 0.51
SGCE-208ENST00000450385 AMHP03971 560 aa18.22■□□□□ 0.51
SGCE-208ENST00000450385 CA3P07451 260 aa18.22■□□□□ 0.51
SGCE-208ENST00000450385 MKRN4PQ13434 485 aaPredicted RBP18.22■□□□□ 0.51
SGCE-208ENST00000450385 JAKMIP3Q5VZ66 844 aa18.22■□□□□ 0.51
SGCE-208ENST00000450385 ZNF746Q6NUN9 644 aaPredicted RBP18.22■□□□□ 0.51
SGCE-208ENST00000450385 ABHD15Q6UXT9 468 aa18.22■□□□□ 0.51
SGCE-208ENST00000450385 PLA2G4DQ86XP0 818 aa18.22■□□□□ 0.51
SGCE-208ENST00000450385 SMAP1Q8IYB5 467 aaPredicted RBP18.22■□□□□ 0.51
SGCE-208ENST00000450385 DBF4BQ8NFT6 615 aa18.22■□□□□ 0.51
SGCE-208ENST00000450385 PHKBQ93100 1093 aa18.22■□□□□ 0.51
SGCE-208ENST00000450385 LMCD1Q9NZU5 365 aa18.22■□□□□ 0.51
SGCE-208ENST00000450385 TCEAL9Q9UHQ7 104 aa18.22■□□□□ 0.51
SGCE-208ENST00000450385 FAM86B1E9PN63 330 aa18.21■□□□□ 0.51
SGCE-208ENST00000450385 DLL1O00548 723 aa18.21■□□□□ 0.51
SGCE-208ENST00000450385 HBP1O60381 514 aa18.21■□□□□ 0.51
SGCE-208ENST00000450385 FAM86B2P0C5J1 330 aa18.21■□□□□ 0.51
SGCE-208ENST00000450385 CCT2P78371 535 aaKnown RBP18.21■□□□□ 0.51
SGCE-208ENST00000450385 ITGB3BPQ13352 177 aaPredicted RBP18.21■□□□□ 0.51
SGCE-208ENST00000450385 IER5Q5VY09 327 aa18.21■□□□□ 0.51
SGCE-208ENST00000450385 ZNF710Q8N1W2 664 aa18.21■□□□□ 0.51
SGCE-208ENST00000450385 SYMPKQ92797 1274 aaKnown RBP18.21■□□□□ 0.51
SGCE-208ENST00000450385 TSPYL2Q9H2G4 693 aaPredicted RBP18.21■□□□□ 0.51
SGCE-208ENST00000450385 TMEM260Q9NX78 707 aa18.21■□□□□ 0.51
SGCE-208ENST00000450385 PCDHA2Q9Y5H9 948 aa18.21■□□□□ 0.51
SGCE-208ENST00000450385 COL1A2P08123 1366 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 POTEB3A0JP26 581 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 DHX15O43143 795 aaKnown RBP18.2■□□□□ 0.5
SGCE-208ENST00000450385 GTPBP6O43824 516 aaPredicted RBP18.2■□□□□ 0.5
SGCE-208ENST00000450385 INSRRP14616 1297 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 MYOGP15173 224 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 XBP1P17861 261 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 NLRP5P59047 1200 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 KRT76Q01546 638 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 TAP1Q03518 808 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 MARCH8Q5T0T0 291 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 MIS18BP1Q6P0N0 1132 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 POTEBQ6S5H4 581 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 TOP1MTQ969P6 601 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 PCYT2Q99447 389 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 ZNF577Q9BSK1 485 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 TELO2Q9Y4R8 837 aa18.2■□□□□ 0.5
SGCE-208ENST00000450385 VCANP13611 3396 aa18.19■□□□□ 0.5
SGCE-208ENST00000450385 DAGLBQ8NCG7 672 aa18.19■□□□□ 0.5
SGCE-208ENST00000450385 ATXN2LQ8WWM7 1075 aaKnown RBP18.19■□□□□ 0.5
SGCE-208ENST00000450385 PGBD1Q96JS3 809 aa18.19■□□□□ 0.5
SGCE-208ENST00000450385 SAMD11Q96NU1 681 aa18.19■□□□□ 0.5
SGCE-208ENST00000450385 IFIH1Q9BYX4 1025 aaKnown RBP18.19■□□□□ 0.5
SGCE-208ENST00000450385 PKD2L1Q9P0L9 805 aa18.19■□□□□ 0.5
SGCE-208ENST00000450385 PCDHA4Q9UN74 947 aa18.19■□□□□ 0.5
SGCE-208ENST00000450385 PCDHA10Q9Y5I2 948 aa18.19■□□□□ 0.5
SGCE-208ENST00000450385 WDR81Q562E7 1941 aa18.19■□□□□ 0.5
SGCE-208ENST00000450385 CYP3A7-CYP3A51PA0A087WV96 503 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 SMIM35A0A1B0GVV1 85 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 M0QZ92 97 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 CHRNA1P02708 482 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 IGFBP4P22692 258 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 CYP3A7P24462 503 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 MARK3P27448 753 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 DEFB103AP81534 67 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 HTRA4P83105 476 aaPredicted RBP18.18■□□□□ 0.5
SGCE-208ENST00000450385 ADGRE1Q14246 886 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 PLCB4Q15147 1175 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 ZNF484Q5JVG2 852 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 MOXD1Q6UVY6 613 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 ATP8B4Q8TF62 1192 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 RIT2Q99578 217 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 FTHL17Q9BXU8 183 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 NCOA5Q9HCD5 579 aaKnown RBP18.18■□□□□ 0.5
SGCE-208ENST00000450385 RNF216Q9NWF9 866 aaPredicted RBP18.18■□□□□ 0.5
SGCE-208ENST00000450385 TRPC6Q9Y210 931 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 CUL9Q8IWT3 2517 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 KDM3AQ9Y4C1 1321 aa18.18■□□□□ 0.5
SGCE-208ENST00000450385 PSAPP07602 524 aa18.17■□□□□ 0.5
SGCE-208ENST00000450385 ERVK-21P61565 698 aa18.17■□□□□ 0.5
SGCE-208ENST00000450385 MGAT3Q09327 533 aa18.17■□□□□ 0.5
SGCE-208ENST00000450385 ODR4Q5SWX8 454 aa18.17■□□□□ 0.5
SGCE-208ENST00000450385 TSHZ1Q6ZSZ6 1077 aa18.17■□□□□ 0.5
SGCE-208ENST00000450385 RDM1Q8NG50 284 aa18.17■□□□□ 0.5
SGCE-208ENST00000450385 BBXQ8WY36 941 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms