RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CCDC186Q7Z3E2 898 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 SMCR8Q8TEV9 937 aaPredicted RBP15.85■□□□□ 0.13
USP39-207ENST00000450066 ZNF526Q8TF50 670 aaPredicted RBP15.85■□□□□ 0.13
USP39-207ENST00000450066 NOC3LQ8WTT2 800 aaKnown RBP15.85■□□□□ 0.13
USP39-207ENST00000450066 REEP2Q9BRK0 252 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 KCND2Q9NZV8 630 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 PCDHA2Q9Y5H9 948 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 SOWAHBA6NEL2 793 aa15.84■□□□□ 0.13
USP39-207ENST00000450066 LRRC10BA6NIK2 292 aa15.84■□□□□ 0.13
USP39-207ENST00000450066 B4DLN1 442 aa15.84■□□□□ 0.13
USP39-207ENST00000450066 ICAM3P32942 547 aa15.84■□□□□ 0.13
USP39-207ENST00000450066 RAD51AP2Q09MP3 1159 aa15.84■□□□□ 0.13
USP39-207ENST00000450066 MKRN3Q13064 507 aaKnown RBP15.84■□□□□ 0.13
USP39-207ENST00000450066 APTXQ7Z2E3 356 aaKnown RBP15.84■□□□□ 0.13
USP39-207ENST00000450066 TRIM47Q96LD4 638 aa15.84■□□□□ 0.13
USP39-207ENST00000450066 RUSC1Q9BVN2 902 aa15.84■□□□□ 0.13
USP39-207ENST00000450066 R3HDMLQ9H3Y0 253 aa15.84■□□□□ 0.13
USP39-207ENST00000450066 THAP9Q9H5L6 903 aa15.84■□□□□ 0.13
USP39-207ENST00000450066 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.84■□□□□ 0.132e-8■■■□□ 16.1
USP39-207ENST00000450066 A0A1B0GTH6 734 aa15.83■□□□□ 0.13
USP39-207ENST00000450066 ZBTB39O15060 712 aa15.83■□□□□ 0.13
USP39-207ENST00000450066 PTGS1P23219 599 aa15.83■□□□□ 0.13
USP39-207ENST00000450066 CACNB1Q02641 598 aaPredicted RBP15.83■□□□□ 0.13
USP39-207ENST00000450066 KCTD2Q14681 263 aa15.83■□□□□ 0.13
USP39-207ENST00000450066 CCDC144BQ3MJ40 725 aa15.83■□□□□ 0.13
USP39-207ENST00000450066 ANKRD40Q6AI12 368 aa15.83■□□□□ 0.13
USP39-207ENST00000450066 FOXR2Q6PJQ5 311 aa15.83■□□□□ 0.13
USP39-207ENST00000450066 C1orf186Q6ZWK4 172 aa15.83■□□□□ 0.13
USP39-207ENST00000450066 SMAP1Q8IYB5 467 aaPredicted RBP15.83■□□□□ 0.13
USP39-207ENST00000450066 MYOCDQ8IZQ8 938 aa15.83■□□□□ 0.13
USP39-207ENST00000450066 GPRC5AQ8NFJ5 357 aa15.83■□□□□ 0.13
USP39-207ENST00000450066 DUSP9Q99956 384 aaKnown RBP15.83■□□□□ 0.13
USP39-207ENST00000450066 INTS13Q9NVM9 706 aa15.83■□□□□ 0.13
USP39-207ENST00000450066 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.83■□□□□ 0.13
USP39-207ENST00000450066 LIMA1Q9UHB6 759 aaKnown RBP15.83■□□□□ 0.13
USP39-207ENST00000450066 DNAJC25-GNG10A0A024R161 153 aa15.83■□□□□ 0.12
USP39-207ENST00000450066 GCLCP48506 637 aaPredicted RBP15.83■□□□□ 0.12
USP39-207ENST00000450066 TCP11X2Q5H9J9 407 aa15.83■□□□□ 0.12
USP39-207ENST00000450066 ANKRD20A12PQ8NF67 263 aa15.83■□□□□ 0.12
USP39-207ENST00000450066 MMP19Q99542 508 aa15.83■□□□□ 0.12
USP39-207ENST00000450066 MPHOSPH6Q99547 160 aaKnown RBP15.83■□□□□ 0.12
USP39-207ENST00000450066 SEMA6BQ9H3T3 888 aa15.83■□□□□ 0.12
USP39-207ENST00000450066 JPH1Q9HDC5 661 aaPredicted RBP15.83■□□□□ 0.12
USP39-207ENST00000450066 DBR1Q9UK59 544 aaKnown RBP15.83■□□□□ 0.12
USP39-207ENST00000450066 PCDHA10Q9Y5I2 948 aa15.83■□□□□ 0.12
USP39-207ENST00000450066 COL4A3BPQ9Y5P4 624 aa15.83■□□□□ 0.12
USP39-207ENST00000450066 KIF20AO95235 890 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 HUNKP57058 714 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 PSMC5P62195 406 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 CCNA1P78396 465 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 LRRC63Q05C16 580 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 FSTL1Q12841 308 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 NR1I3Q14994 352 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 TMC6Q7Z403 805 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 FILIP1Q7Z7B0 1213 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 IRF2BP1Q8IU81 584 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 VSTM4Q8IW00 320 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 C4orf19Q8IY42 314 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 CSGALNACT2Q8N6G5 542 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 SRRTQ9BXP5 876 aaKnown RBP15.82■□□□□ 0.12
USP39-207ENST00000450066 KIAA1217Q5T5P2 1943 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 LOXHD1Q8IVV2 1947 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 ARHGEF35A5YM69 484 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 KCNJ18B7U540 433 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 TBCAO75347 108 aaKnown RBP15.82■□□□□ 0.12
USP39-207ENST00000450066 GAP43P17677 238 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 MSNP26038 577 aaKnown RBP15.82■□□□□ 0.12
USP39-207ENST00000450066 EEF1GP26641 437 aaKnown RBP15.82■□□□□ 0.12
USP39-207ENST00000450066 GSDMDP57764 484 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 KCNJ12Q14500 433 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 LRRC41Q15345 812 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 GLIS3Q8NEA6 775 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 ZNF830Q96NB3 372 aaPredicted RBP15.82■□□□□ 0.12
USP39-207ENST00000450066 ZHX3Q9H4I2 956 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 SLC9A2Q9UBY0 812 aa15.82■□□□□ 0.12
USP39-207ENST00000450066 PGK2P07205 417 aa15.81■□□□□ 0.12
USP39-207ENST00000450066 GUCY2CP25092 1073 aa15.81■□□□□ 0.12
USP39-207ENST00000450066 KRT31Q15323 416 aa15.81■□□□□ 0.12
USP39-207ENST00000450066 FILIP1LQ4L180 1135 aa15.81■□□□□ 0.12
USP39-207ENST00000450066 FAM43AQ8N2R8 423 aa15.81■□□□□ 0.12
USP39-207ENST00000450066 KCNF1Q9H3M0 494 aa15.81■□□□□ 0.12
USP39-207ENST00000450066 TBC1D7Q9P0N9 293 aa15.81■□□□□ 0.12
USP39-207ENST00000450066 MORF4L1Q9UBU8 362 aa15.81■□□□□ 0.12
USP39-207ENST00000450066 LOC102724159A0A0B4J2E5 919 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 SP2Q02086 613 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 PWP2Q15269 919 aaKnown RBP15.8■□□□□ 0.12
USP39-207ENST00000450066 WDR78Q5VTH9 848 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 FGD4Q96M96 766 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 PTPN18Q99952 460 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 FGFBP2Q9BYJ0 223 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 PORCNQ9H237 461 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 RTN4Q9NQC3 1192 aaKnown RBP15.8■□□□□ 0.12
USP39-207ENST00000450066 OLFML3Q9NRN5 406 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 ODF2LQ9ULJ1 636 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 TRPM7Q96QT4 1865 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 RSPH10B2B2RC85 870 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 PSAPP07602 524 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 RSPH10BP0C881 870 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 TGFB3P10600 412 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 YWHABP31946 246 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms