RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 MYL3P08590 195 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 TRAPPC10P48553 1259 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 ACLYP53396 1101 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 ACTR2P61160 394 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 NKX3-2P78367 333 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 SPIRE1Q08AE8 756 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 NOLC1Q14978 699 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCDC171-203ENST00000449575 CALCRLQ16602 461 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 RNF180Q86T96 592 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 PPTC7Q8NI37 304 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 PCYT2Q99447 389 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 GAS7O60861 476 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 CST5P28325 142 aaPredicted RBP11.08□□□□□ -0.64
CCDC171-203ENST00000449575 TCF7P36402 384 aaPredicted RBP11.08□□□□□ -0.64
CCDC171-203ENST00000449575 CHMP4BP1P59074 171 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 PURAQ00577 322 aaKnown RBP11.08□□□□□ -0.64
CCDC171-203ENST00000449575 SF3A1Q15459 793 aaKnown RBP11.08□□□□□ -0.64
CCDC171-203ENST00000449575 B3GNT9Q6UX72 402 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 GPT2Q8TD30 523 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 KAT2BQ92831 832 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 SDF4Q9BRK5 362 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 CEP290O15078 2479 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 GRIN2DO15399 1336 aa11.08□□□□□ -0.64
CCDC171-203ENST00000449575 A0A1W2PQ45 241 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-203ENST00000449575 A0A1W2PQY0 241 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 SYCE3A1L190 88 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 POTEMA6NI47 508 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 DNM1LO00429 736 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 NOP56O00567 594 aaKnown RBP11.07□□□□□ -0.64
CCDC171-203ENST00000449575 GRIN1Q05586 938 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 TRMT1LQ7Z2T5 733 aaKnown RBP11.07□□□□□ -0.64
CCDC171-203ENST00000449575 UBE2Q1Q7Z7E8 422 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 ARRDC4Q8NCT1 418 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 C16orf70Q9BSU1 422 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 SENP6Q9GZR1 1112 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-203ENST00000449575 TTC12Q9H892 705 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-203ENST00000449575 SPC25Q9HBM1 224 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 RANBP2P49792 3224 aaKnown RBP11.07□□□□□ -0.64
CCDC171-203ENST00000449575 LGALS2P05162 132 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 HOXD8P13378 290 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-203ENST00000449575 TECP42680 631 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 CPT1AP50416 773 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 ATN1P54259 1190 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-203ENST00000449575 DNM1Q05193 864 aaKnown RBP11.07□□□□□ -0.64
CCDC171-203ENST00000449575 PTPAQ15257 358 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 UGCGQ16739 394 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 CCDC60Q8IWA6 550 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-203ENST00000449575 RIT2Q99578 217 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 TEKT3Q9BXF9 490 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 ZSCAN16Q9H4T2 348 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-203ENST00000449575 TBC1D22BQ9NU19 505 aa11.07□□□□□ -0.64
CCDC171-203ENST00000449575 KBTBD13C9JR72 458 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 OR52Z1P0C646 297 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 COL6A1P12109 1028 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 CDC25AP30304 524 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 GABPB1Q06547 395 aaPredicted RBP11.06□□□□□ -0.64
CCDC171-203ENST00000449575 ABHD15Q6UXT9 468 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 SEPT1Q8WYJ6 367 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 FAM20AQ96MK3 541 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 SPTLC3Q9NUV7 552 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 TMEM51Q9NW97 253 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 TMEM63CQ9P1W3 806 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 ELP1O95163 1332 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 PP2D1A8MPX8 630 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 TBX3O15119 743 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 MARCH6O60337 910 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 ATG7O95352 703 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 MARK3P27448 753 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 MARCKSP29966 332 aaPredicted RBP11.06□□□□□ -0.64
CCDC171-203ENST00000449575 ATP2C1P98194 919 aaPredicted RBP11.06□□□□□ -0.64
CCDC171-203ENST00000449575 HIC1Q14526 733 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 DGKDQ16760 1214 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 GIMAP8Q8ND71 665 aaPredicted RBP11.06□□□□□ -0.64
CCDC171-203ENST00000449575 NAP1L4Q99733 375 aaKnown RBP11.06□□□□□ -0.64
CCDC171-203ENST00000449575 RNPEPQ9H4A4 650 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 WRAP73Q9P2S5 460 aaPredicted RBP11.06□□□□□ -0.64
CCDC171-203ENST00000449575 PCDHA12Q9UN75 941 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 PHF24Q9UPV7 400 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 SAMM50Q9Y512 469 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 ARID2Q68CP9 1835 aa11.06□□□□□ -0.64
CCDC171-203ENST00000449575 A0A087WWV3 80 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 PPFIA4O75335 1185 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 TPM3P06753 285 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 ATP4AP20648 1035 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 NCAPH2Q6IBW4 605 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 SWSAP1Q6NVH7 229 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 DISC1Q9NRI5 854 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 RGL1Q9NZL6 768 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 PDE4DIPQ5VU43 2346 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 LOXHD1Q8IVV2 1947 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 TMEM150BA6NC51 233 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 SUPT20HL2P0C7V6 817 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 KRT76Q01546 638 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 PPP2R5CQ13362 524 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 ZNF746Q6NUN9 644 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-203ENST00000449575 ZNF771Q7L3S4 317 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-203ENST00000449575 PCSK9Q8NBP7 692 aaKnown RBP11.05□□□□□ -0.64
CCDC171-203ENST00000449575 BANK1Q8NDB2 785 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 VTI1AQ96AJ9 217 aa11.05□□□□□ -0.64
CCDC171-203ENST00000449575 ZBTB10Q96DT7 871 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms