RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PRKAR2AP13861 404 aaKnown RBP16.38■□□□□ 0.21
TNF-208ENST00000449264 CNGA1P29973 690 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 UGCGQ16739 394 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 HSDL1Q3SXM5 330 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 NAALADL2Q58DX5 795 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 HYIQ5T013 277 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 KCNK18Q7Z418 384 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 GRAMD1CQ8IYS0 662 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 OR6J1Q8NGC5 347 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 HSD17B14Q9BPX1 270 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 TNMDQ9H2S6 317 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 TUFT1Q9NNX1 390 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 WRAP73Q9P2S5 460 aaPredicted RBP16.38■□□□□ 0.21
TNF-208ENST00000449264 PTCH2Q9Y6C5 1203 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 LOXHD1Q8IVV2 1947 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 SLC26A4O43511 780 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 P4HBP07237 508 aaKnown RBP16.37■□□□□ 0.21
TNF-208ENST00000449264 SLFN14P0C7P3 912 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 AKR1A1P14550 325 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 TCF7P36402 384 aaPredicted RBP16.37■□□□□ 0.21
TNF-208ENST00000449264 PRMT2P55345 433 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 CACNB2Q08289 660 aaPredicted RBP16.37■□□□□ 0.21
TNF-208ENST00000449264 LAMC2Q13753 1193 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 DHX8Q14562 1220 aaKnown RBP16.37■□□□□ 0.21
TNF-208ENST00000449264 SWSAP1Q6NVH7 229 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 PDXDC2PQ6P474 469 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 ABHD15Q6UXT9 468 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 TRMT1LQ7Z2T5 733 aaKnown RBP16.37■□□□□ 0.21
TNF-208ENST00000449264 CCDC60Q8IWA6 550 aaPredicted RBP16.37■□□□□ 0.21
TNF-208ENST00000449264 STAMQ92783 540 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 TIGD1Q96MW7 591 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 GPR20Q99678 358 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 GABBR1Q9UBS5 961 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 NRBP1Q9UHY1 535 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 FAM184BQ9ULE4 1060 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 GSTTP1A0A1W2PQM5 241 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 E9PMD0 336 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 NKRFO15226 690 aaKnown RBP eCLIP16.37■□□□□ 0.21
TNF-208ENST00000449264 FOXN1O15353 648 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 AFMP43652 599 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
TNF-208ENST00000449264 TLK2Q86UE8 772 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 SEPT1Q8WYJ6 367 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 LARP4BQ92615 738 aaKnown RBP16.37■□□□□ 0.21
TNF-208ENST00000449264 ZSWIM4Q9H7M6 989 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 STK17AQ9UEE5 414 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 USP25Q9UHP3 1055 aa16.37■□□□□ 0.21
TNF-208ENST00000449264 SSBP05455 408 aaKnown RBP eCLIP16.36■□□□□ 0.21
TNF-208ENST00000449264 HSPA8P11142 646 aaKnown RBP16.36■□□□□ 0.21
TNF-208ENST00000449264 CCND3P30281 292 aaPredicted RBP16.36■□□□□ 0.21
TNF-208ENST00000449264 PSMC5P62195 406 aa16.36■□□□□ 0.21
TNF-208ENST00000449264 PSMC6P62333 389 aa16.36■□□□□ 0.21
TNF-208ENST00000449264 UTP14CQ5TAP6 766 aaKnown RBP16.36■□□□□ 0.21
TNF-208ENST00000449264 CKAP2LQ8IYA6 745 aa16.36■□□□□ 0.21
TNF-208ENST00000449264 SLAIN1Q8ND83 568 aa16.36■□□□□ 0.21
TNF-208ENST00000449264 PXYLP1Q8TE99 480 aa16.36■□□□□ 0.21
TNF-208ENST00000449264 PIGOQ8TEQ8 1089 aa16.36■□□□□ 0.21
TNF-208ENST00000449264 AFG1LQ8WV93 481 aa16.36■□□□□ 0.21
TNF-208ENST00000449264 RAD54LQ92698 747 aa16.36■□□□□ 0.21
TNF-208ENST00000449264 ERCC4Q92889 916 aaPredicted RBP16.36■□□□□ 0.21
TNF-208ENST00000449264 ATP6V0A1Q93050 837 aa16.36■□□□□ 0.21
TNF-208ENST00000449264 CCDC34Q96HJ3 373 aa16.36■□□□□ 0.21
TNF-208ENST00000449264 ZNF302Q9NR11 478 aa16.36■□□□□ 0.21
TNF-208ENST00000449264 BLOC1S4Q9NUP1 217 aa16.36■□□□□ 0.21
TNF-208ENST00000449264 DYNC1LI2O43237 492 aaPredicted RBP16.35■□□□□ 0.21
TNF-208ENST00000449264 ATG7O95352 703 aa16.35■□□□□ 0.21
TNF-208ENST00000449264 INHAP05111 366 aa16.35■□□□□ 0.21
TNF-208ENST00000449264 HSPA1AP0DMV8 641 aaKnown RBP16.35■□□□□ 0.21
TNF-208ENST00000449264 HSPA1BP0DMV9 641 aaKnown RBP16.35■□□□□ 0.21
TNF-208ENST00000449264 GRK4P32298 578 aa16.35■□□□□ 0.21
TNF-208ENST00000449264 PNOCQ13519 176 aa16.35■□□□□ 0.21
TNF-208ENST00000449264 MCM6Q14566 821 aa16.35■□□□□ 0.21
TNF-208ENST00000449264 TRIM50Q86XT4 487 aa16.35■□□□□ 0.21
TNF-208ENST00000449264 PPTC7Q8NI37 304 aa16.35■□□□□ 0.21
TNF-208ENST00000449264 EMID1Q96A84 441 aaPredicted RBP16.35■□□□□ 0.21
TNF-208ENST00000449264 PAGE5Q96GU1 130 aa16.35■□□□□ 0.21
TNF-208ENST00000449264 CUEDC2Q9H467 287 aa16.35■□□□□ 0.21
TNF-208ENST00000449264 DNM3Q9UQ16 869 aa16.35■□□□□ 0.21
TNF-208ENST00000449264 GNEQ9Y223 722 aaKnown RBP16.35■□□□□ 0.21
TNF-208ENST00000449264 IGSF9BQ9UPX0 1349 aa16.35■□□□□ 0.21
TNF-208ENST00000449264 ARID2Q68CP9 1835 aa16.35■□□□□ 0.21
TNF-208ENST00000449264 ZBTB39O15060 712 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 PRR29P0C7W0 189 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 CASP1P29466 404 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 PRKCEQ02156 737 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 POSTNQ15063 836 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 FAM160B1Q5W0V3 765 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 KANK3Q6NY19 840 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 CCDC43Q96MW1 224 aaKnown RBP16.34■□□□□ 0.21
TNF-208ENST00000449264 BHMT2Q9H2M3 363 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 AZI2Q9H6S1 392 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 HOOK1Q9UJC3 728 aaKnown RBP16.34■□□□□ 0.21
TNF-208ENST00000449264 SEPT4O43236 478 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 MMP3P08254 477 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 PLA2G4BP0C869 781 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 MUTP22033 750 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 ZSCAN23Q3MJ62 389 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 SV2BQ7L1I2 683 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 SH3TC2Q8TF17 1288 aa16.34■□□□□ 0.21
TNF-208ENST00000449264 GLG1Q92896 1179 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms