RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TBCKQ8TEA7 893 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 GLG1Q92896 1179 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 UIMC1Q96RL1 719 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 TBC1D22BQ9NU19 505 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 SLC4A7Q9Y6M7 1214 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 CHD7Q9P2D1 2997 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 RSPH10B2B2RC85 870 aa15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 MSH4O15457 936 aa15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 CAND2O75155 1236 aa15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 RSPH10BP0C881 870 aa15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 ATP4AP20648 1035 aa15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 THPOP40225 353 aa15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 ZNF697Q5TEC3 545 aa15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 RUFY4Q6ZNE9 571 aa15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 NSUN7Q8NE18 718 aaKnown RBP15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 FAM161BQ96MY7 647 aa15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 CDX2Q99626 313 aaPredicted RBP15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 ZNF577Q9BSK1 485 aa15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 C22orf23Q9BZE7 217 aa15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 FTOQ9C0B1 505 aaKnown RBP eCLIP15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 MTIF3Q9H2K0 278 aaKnown RBP15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 ORC3Q9UBD5 711 aaPredicted RBP15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 STXBP5LQ9Y2K9 1186 aa15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 YBX2Q9Y2T7 364 aaKnown RBP15.98■□□□□ 0.15
RTFDC1-204ENST00000449062 MARK3P27448 753 aa15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 RBM25P49756 843 aaKnown RBP15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 SETQ01105 290 aaPredicted RBP15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 PPFIA1Q13136 1202 aa15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 GRIK4Q16099 956 aa15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 Q4G0T1 1027 aa15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 ZNF746Q6NUN9 644 aaPredicted RBP15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 B3GNT9Q6UX72 402 aa15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 CCDC60Q8IWA6 550 aaPredicted RBP15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 PHOSPHO2Q8TCD6 241 aa15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 OXER1Q8TDS5 423 aa15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 SLC5A5Q92911 643 aa15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 TIFAQ96CG3 184 aa15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 MAFBQ9Y5Q3 323 aaPredicted RBP15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 CUL9Q8IWT3 2517 aa15.97■□□□□ 0.15
RTFDC1-204ENST00000449062 RRN3P2A6NIE6 340 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 DDX39AO00148 427 aaKnown RBP15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 BAIAP3O94812 1187 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 CHRNA1P02708 482 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 ACTN1P12814 892 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 ATP2A2P16615 1042 aaKnown RBP15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 SLC26A2P50443 739 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 RABGGTBP53611 331 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 GRIN2CQ14957 1233 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 PLEKHG4Q58EX7 1191 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 SWSAP1Q6NVH7 229 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 CNKSR3Q6P9H4 555 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 MOXD1Q6UVY6 613 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 TNFRSF25Q93038 417 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 ZBTB10Q96DT7 871 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 RIT2Q99578 217 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 ZNF576Q9H609 170 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 AZI2Q9H6S1 392 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 LIMCH1Q9UPQ0 1083 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 PCDHA11Q9Y5I1 949 aa15.96■□□□□ 0.15
RTFDC1-204ENST00000449062 ABHD14A-ACY1A0A1B0GW23 586 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 ZBBXA8MT70 800 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 ZBTB42B2RXF5 422 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 JAK2O60674 1132 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 PSMD10O75832 226 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 TDP2O95551 362 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 MYOGP15173 224 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 NONOQ15233 471 aaKnown RBP eCLIP15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 RAB30Q15771 203 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 EARS2Q5JPH6 523 aaKnown RBP15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 TAF2Q6P1X5 1199 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 KRT25Q7Z3Z0 450 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 DBF4BQ8NFT6 615 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 GJA10Q969M2 543 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 PCDHA10Q9Y5I2 948 aa15.95■□□□□ 0.14
RTFDC1-204ENST00000449062 POTEB3A0JP26 581 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 WDR5P61964 334 aaKnown RBP15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 KRT76Q01546 638 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 MGAT3Q09327 533 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 INF2Q27J81 1249 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 MIS18BP1Q6P0N0 1132 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 POTEBQ6S5H4 581 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 HERC6Q8IVU3 1022 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 SMAP1Q8IYB5 467 aaPredicted RBP15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 ETNPPLQ8TBG4 499 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 ATP8B4Q8TF62 1192 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 TRAPPC12Q8WVT3 735 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 WASF1Q92558 559 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 ZNF302Q9NR11 478 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 MSRAQ9UJ68 235 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 TUBE1Q9UJT0 475 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 PCDHA2Q9Y5H9 948 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 KAT6AQ92794 2004 aa15.94■□□□□ 0.14
RTFDC1-204ENST00000449062 ZNF862O60290 1169 aa15.93■□□□□ 0.14
RTFDC1-204ENST00000449062 HBP1O60381 514 aa15.93■□□□□ 0.14
RTFDC1-204ENST00000449062 IKBKEQ14164 716 aa15.93■□□□□ 0.14
RTFDC1-204ENST00000449062 PPP4R3AQ6IN85 833 aa15.93■□□□□ 0.14
RTFDC1-204ENST00000449062 PDXDC2PQ6P474 469 aa15.93■□□□□ 0.14
RTFDC1-204ENST00000449062 DNAJB3Q8WWF6 145 aa15.93■□□□□ 0.14
RTFDC1-204ENST00000449062 TNPO1Q92973 898 aaKnown RBP15.93■□□□□ 0.14
RTFDC1-204ENST00000449062 SLC9A7Q96T83 725 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms