RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 ITGA7Q13683 1181 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 DGKDQ16760 1214 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 ARL6IP4Q66PJ3 421 aaKnown RBP13.04□□□□□ -0.32
LINC00408-201ENST00000447784 MIER3Q7Z3K6 550 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 SH3RF1Q7Z6J0 888 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 FAM126BQ8IXS8 530 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 SMAP1Q8IYB5 467 aaPredicted RBP13.04□□□□□ -0.32
LINC00408-201ENST00000447784 TDHQ8IZJ6 230 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 ERMNQ8TAM6 284 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 TMEM60Q9H2L4 133 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 TMEM39AQ9NV64 488 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 LCTP09848 1927 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 SMCHD1A6NHR9 2005 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 TLR3O15455 904 aaKnown RBP13.03□□□□□ -0.32
LINC00408-201ENST00000447784 DHX15O43143 795 aaKnown RBP13.03□□□□□ -0.32
LINC00408-201ENST00000447784 YEATS4O95619 227 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 PSAPP07602 524 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 MYL3P08590 195 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 NASPP49321 788 aaPredicted RBP13.03□□□□□ -0.32
LINC00408-201ENST00000447784 SLC39A14Q15043 492 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 HSDL1Q3SXM5 330 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 LRIT3Q3SXY7 679 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 UTP14CQ5TAP6 766 aaKnown RBP13.03□□□□□ -0.32
LINC00408-201ENST00000447784 FAM160B1Q5W0V3 765 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 NCAPH2Q6IBW4 605 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 C4orf32Q8N8J7 132 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 RDM1Q8NG50 284 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 KCNG4Q8TDN1 519 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 GLG1Q92896 1179 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 GPR20Q99678 358 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 MTG1Q9BT17 334 aaPredicted RBP13.03□□□□□ -0.32
LINC00408-201ENST00000447784 FTOQ9C0B1 505 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC00408-201ENST00000447784 SCAND2PQ9GZW5 306 aaPredicted RBP13.03□□□□□ -0.32
LINC00408-201ENST00000447784 UNC45AQ9H3U1 944 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 BCAS3Q9H6U6 928 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 TBX21Q9UL17 535 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 PCDHA10Q9Y5I2 948 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 STK24Q9Y6E0 443 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 GRIN2DO15399 1336 aa13.03□□□□□ -0.32
LINC00408-201ENST00000447784 DNAH12Q6ZR08 3092 aa13.02□□□□□ -0.32
LINC00408-201ENST00000447784 VWA3AA6NCI4 1184 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 SPTLC2O15270 562 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 CCNE2O96020 404 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 CD4P01730 458 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 MMP3P08254 477 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 RAG1P15918 1043 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 MARCKSP29966 332 aaPredicted RBP13.02□□□□□ -0.33
LINC00408-201ENST00000447784 TCF7P36402 384 aaPredicted RBP13.02□□□□□ -0.33
LINC00408-201ENST00000447784 ME1P48163 572 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 FXR2P51116 673 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC00408-201ENST00000447784 CHMP4BP1P59074 171 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 PPP2R5CQ13362 524 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 PDIA5Q14554 519 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 CSPP1Q1MSJ5 1256 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.33
LINC00408-201ENST00000447784 BADQ92934 168 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 SPATA32Q96LK8 384 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 LRWD1Q9UFC0 647 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 VAV3Q9UKW4 847 aa13.02□□□□□ -0.33
LINC00408-201ENST00000447784 DKC1O60832 514 aaKnown RBP eCLIP13.01□□□□□ -0.33
LINC00408-201ENST00000447784 TIMP1P01033 207 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 SUPT20HL2P0C7V6 817 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 ITGB8P26012 769 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 PTPAQ15257 358 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 EPHA7Q15375 998 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 KRT79Q5XKE5 535 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 SWSAP1Q6NVH7 229 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 CKAP2LQ8IYA6 745 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 LINC00301Q8NCQ3 95 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 RASSF8Q8NHQ8 419 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 TNPO1Q92973 898 aaKnown RBP13.01□□□□□ -0.33
LINC00408-201ENST00000447784 ATP6V0A1Q93050 837 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 SMARCAD1Q9H4L7 1026 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 ZNF302Q9NR11 478 aa13.01□□□□□ -0.33
LINC00408-201ENST00000447784 ZNF215Q9UL58 517 aaPredicted RBP13.01□□□□□ -0.33
LINC00408-201ENST00000447784 MCM3APO60318 1980 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 GSTTP1A0A1W2PQM5 241 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 GOLGA6L4A6NEF3 574 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 PPP6R2O75170 966 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 LONP1P36776 959 aaKnown RBP13□□□□□ -0.33
LINC00408-201ENST00000447784 TXLNAP40222 546 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 UBA7P41226 1012 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 STAT5BP51692 787 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 PSMC6P62333 389 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 PTPN11Q06124 597 aaPredicted RBP13□□□□□ -0.33
LINC00408-201ENST00000447784 HAUS3Q68CZ6 603 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 MFSD5Q6N075 450 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 PDXDC2PQ6P474 469 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 NFRKBQ6P4R8 1299 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 ABHD15Q6UXT9 468 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 NEK9Q8TD19 979 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 AK8Q96MA6 479 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 KATNAL1Q9BW62 490 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 GABBR1Q9UBS5 961 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 RCOR1Q9UKL0 485 aa13□□□□□ -0.33
LINC00408-201ENST00000447784 SRPRBQ9Y5M8 271 aaKnown RBP13□□□□□ -0.33
LINC00408-201ENST00000447784 POTEMA6NI47 508 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 H3BRB1 525 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 B4GALT4O60513 344 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms