RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 CALM1P0DP23 149 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 CALM2P0DP24 149 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 CALM3P0DP25 149 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 PCP11498 1178 aaKnown RBP5.98□□□□□ -1.45
LMO3-209ENST00000447609 DNM2P50570 870 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 FXR1P51114 621 aaKnown RBP eCLIP5.98□□□□□ -1.45
LMO3-209ENST00000447609 APLP1P51693 650 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 PRELPP51888 382 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 GTF2A2P52657 109 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 FKBP1BP68106 108 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 XRCC4Q13426 336 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 RIPK1Q13546 671 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 MTMR2Q13614 643 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 USP17L2Q6R6M4 530 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 TEX9Q8N6V9 391 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 CCDC63Q8NA47 563 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 PNMA1Q8ND90 353 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 CYFIP2Q96F07 1278 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 CCDC43Q96MW1 224 aaKnown RBP5.98□□□□□ -1.45
LMO3-209ENST00000447609 GMLQ99445 158 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 MAP3K14Q99558 947 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 PLCD4Q9BRC7 762 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 RABEP2Q9H5N1 569 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 ZFYVE28Q9HCC9 887 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 FAM198AQ9UFP1 575 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 ZBTB21Q9ULJ3 1066 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 FRMPD2Q68DX3 1309 aaPredicted RBP5.98□□□□□ -1.45
LMO3-209ENST00000447609 PITPNM2Q9BZ72 1349 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 ZNF831Q5JPB2 1677 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 MANSC4A6NHS7 340 aaPredicted RBP5.98□□□□□ -1.45
LMO3-209ENST00000447609 KCNJ18B7U540 433 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 KIF28PB7ZC32 967 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 ENC1O14682 589 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 ALAS1P13196 640 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 EEF2P13639 858 aaKnown RBP5.98□□□□□ -1.45
LMO3-209ENST00000447609 CCT6AP40227 531 aaKnown RBP5.98□□□□□ -1.45
LMO3-209ENST00000447609 ERVK-24P63145 666 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 C2orf54Q08AI8 447 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 KCNJ12Q14500 433 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 KRT31Q15323 416 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 E2F5Q15329 346 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 ZRSR2Q15696 482 aaKnown RBP5.98□□□□□ -1.45
LMO3-209ENST00000447609 IFI16Q16666 785 aaKnown RBP5.98□□□□□ -1.45
LMO3-209ENST00000447609 FKBP15Q5T1M5 1219 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 RRAGBQ5VZM2 374 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 ITFG2Q969R8 447 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 TBC1D31Q96DN5 1066 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 CCDC42Q96M95 316 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 ZSCAN10Q96SZ4 725 aaPredicted RBP5.98□□□□□ -1.45
LMO3-209ENST00000447609 RIOK1Q9BRS2 568 aaKnown RBP5.98□□□□□ -1.45
LMO3-209ENST00000447609 DDX20Q9UHI6 824 aaKnown RBP5.98□□□□□ -1.45
LMO3-209ENST00000447609 BAIAP2L1Q9UHR4 511 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 CTNND2Q9UQB3 1225 aa5.98□□□□□ -1.45
LMO3-209ENST00000447609 LRRC10BA6NIK2 292 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 B4DLN1 442 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 SSBP05455 408 aaKnown RBP eCLIP5.97□□□□□ -1.45
LMO3-209ENST00000447609 BMP3P12645 472 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 MYH8P13535 1937 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 TAF1P21675 1872 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 CAP2P40123 477 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 SH3BGRP55822 239 aaPredicted RBP5.97□□□□□ -1.45
LMO3-209ENST00000447609 RHBDL3P58872 404 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 HTRA3P83110 453 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 LACTBP83111 547 aaPredicted RBP5.97□□□□□ -1.45
LMO3-209ENST00000447609 PTPN21Q16825 1174 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 KIAA0753Q2KHM9 967 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 ANKRD20A8PQ5CZ79 823 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 LMNTD2Q8IXW0 634 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 MTMR14Q8NCE2 650 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 CCDC197Q8NCU1 140 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 SPATA4Q8NEY3 305 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 MICAL1Q8TDZ2 1067 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 RRP36Q96EU6 259 aaKnown RBP5.97□□□□□ -1.45
LMO3-209ENST00000447609 RNPC3Q96LT9 517 aaKnown RBP5.97□□□□□ -1.45
LMO3-209ENST00000447609 ZIM3Q96PE6 472 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 MYL10Q9BUA6 226 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 SLC26A6Q9BXS9 759 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 TPX2Q9ULW0 747 aaKnown RBP5.97□□□□□ -1.45
LMO3-209ENST00000447609 CAPN11Q9UMQ6 739 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 ANKRD36CQ5JPF3 1778 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 GRID2IPA4D2P6 1211 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 AHCYL1O43865 530 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 ZMYND10O75800 440 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 GOLGA8HP0CJ92 632 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 TRIM21P19474 475 aaKnown RBP5.97□□□□□ -1.45
LMO3-209ENST00000447609 STX17P56962 302 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 NLRP5P59047 1200 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 ZBED6P86452 979 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 CDK17Q00537 523 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 PPP1R7Q15435 360 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 USH1GQ495M9 461 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 AGBL2Q5U5Z8 902 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 TTC19Q6DKK2 380 aaPredicted RBP5.97□□□□□ -1.45
LMO3-209ENST00000447609 DPP9Q86TI2 863 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 CLEC10AQ8IUN9 316 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 SPATA20Q8TB22 786 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 HVCN1Q96D96 273 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 DTNBP1Q96EV8 351 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 DNAJC7Q99615 494 aa5.97□□□□□ -1.45
LMO3-209ENST00000447609 STMN4Q9H169 189 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms