RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 LPIN1Q14693 890 aa16.8■□□□□ 0.28
SYNCRIP-203ENST00000444272 RANBP17Q9H2T7 1088 aaKnown RBP16.8■□□□□ 0.28
SYNCRIP-203ENST00000444272 EHMT1Q9H9B1 1298 aa16.8■□□□□ 0.28
SYNCRIP-203ENST00000444272 FBXO4Q9UKT5 387 aa16.8■□□□□ 0.28
SYNCRIP-203ENST00000444272 MIA3Q5JRA6 1907 aa16.8■□□□□ 0.28
SYNCRIP-203ENST00000444272 LAMTOR5O43504 91 aa16.79■□□□□ 0.28
SYNCRIP-203ENST00000444272 LRRN2O75325 713 aa16.79■□□□□ 0.28
SYNCRIP-203ENST00000444272 PRDM1O75626 825 aa16.79■□□□□ 0.28
SYNCRIP-203ENST00000444272 CSTF1Q05048 431 aaKnown RBP16.79■□□□□ 0.28
SYNCRIP-203ENST00000444272 PHLDB3Q6NSJ2 640 aa16.79■□□□□ 0.28
SYNCRIP-203ENST00000444272 ZNF444Q8N0Y2 327 aaPredicted RBP16.79■□□□□ 0.28
SYNCRIP-203ENST00000444272 ZBTB44Q8NCP5 570 aa16.79■□□□□ 0.28
SYNCRIP-203ENST00000444272 C16orf70Q9BSU1 422 aa16.79■□□□□ 0.28
SYNCRIP-203ENST00000444272 SPATA6Q9NWH7 488 aaPredicted RBP16.79■□□□□ 0.28
SYNCRIP-203ENST00000444272 GOLIM4O00461 696 aa16.78■□□□□ 0.28
SYNCRIP-203ENST00000444272 TBC1D4O60343 1298 aa16.78■□□□□ 0.28
SYNCRIP-203ENST00000444272 GDF9O60383 454 aa16.78■□□□□ 0.28
SYNCRIP-203ENST00000444272 PPFIA4O75335 1185 aa16.78■□□□□ 0.28
SYNCRIP-203ENST00000444272 RCSD1Q6JBY9 416 aa16.78■□□□□ 0.28
SYNCRIP-203ENST00000444272 OTOP3Q7RTS5 596 aa16.78■□□□□ 0.28
SYNCRIP-203ENST00000444272 FOXQ1Q9C009 403 aa16.78■□□□□ 0.28
SYNCRIP-203ENST00000444272 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
SYNCRIP-203ENST00000444272 FNDC1Q4ZHG4 1894 aaPredicted RBP16.78■□□□□ 0.28
SYNCRIP-203ENST00000444272 LILRB5O75023 590 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 SURF6O75683 361 aaKnown RBP16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 GNAI2P04899 355 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 STAG3L1P0CL83 205 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 IBSPP21815 317 aaPredicted RBP16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 HSDL1Q3SXM5 330 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 ALDH1L2Q3SY69 923 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 IL31Q6EBC2 164 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 PJA1Q8NG27 643 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 FEZF2Q8TBJ5 459 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 RSAD2Q8WXG1 361 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 MRPS27Q92552 414 aaKnown RBP16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 DNAJC2Q99543 621 aaKnown RBP16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 API5Q9BZZ5 524 aaKnown RBP16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 NGRNQ9NPE2 291 aaKnown RBP16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 SETD4Q9NVD3 440 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 ZSCAN32Q9NX65 697 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 IGSF9Q9P2J2 1179 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 HCSTQ9UBK5 93 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 SUPT16HQ9Y5B9 1047 aaKnown RBP16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 MRVI1Q9Y6F6 885 aa16.77■□□□□ 0.28
SYNCRIP-203ENST00000444272 MINDY4BA8MYZ0 360 aa16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 H3BRB1 525 aa16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 RARSP54136 660 aaKnown RBP16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 LPAL2Q16609 132 aa16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 SOWAHCQ53LP3 525 aaPredicted RBP16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 CCDC149Q6ZUS6 474 aa16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 RTN4RL1Q86UN2 441 aaPredicted RBP16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 COLGALT1Q8NBJ5 622 aa16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 GPR152Q8TDT2 470 aa16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 SPATA33Q96N06 139 aa16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 GPR20Q99678 358 aa16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 TUT1Q9H6E5 874 aaKnown RBP16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 ARHGEF3Q9NR81 526 aa16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 MTMR7Q9Y216 660 aa16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 LZTS1Q9Y250 596 aa16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 AKAP13Q12802 2813 aa16.76■□□□□ 0.27
SYNCRIP-203ENST00000444272 IGSF10Q6WRI0 2623 aa16.75■□□□□ 0.27
SYNCRIP-203ENST00000444272 ADD2P35612 726 aa16.75■□□□□ 0.27
SYNCRIP-203ENST00000444272 SLC16A2P36021 539 aa16.75■□□□□ 0.27
SYNCRIP-203ENST00000444272 RBM25P49756 843 aaKnown RBP16.75■□□□□ 0.27
SYNCRIP-203ENST00000444272 STXBP2Q15833 593 aa16.75■□□□□ 0.27
SYNCRIP-203ENST00000444272 PRR23CQ6ZRP0 262 aa16.75■□□□□ 0.27
SYNCRIP-203ENST00000444272 TMC7Q7Z402 723 aa16.75■□□□□ 0.27
SYNCRIP-203ENST00000444272 PUF60Q9UHX1 559 aaKnown RBP16.75■□□□□ 0.27
SYNCRIP-203ENST00000444272 LRFN2Q9ULH4 789 aa16.75■□□□□ 0.27
SYNCRIP-203ENST00000444272 CHGBP05060 677 aa16.74■□□□□ 0.27
SYNCRIP-203ENST00000444272 GNAT1P11488 350 aa16.74■□□□□ 0.27
SYNCRIP-203ENST00000444272 SRFP11831 508 aa16.74■□□□□ 0.27
SYNCRIP-203ENST00000444272 NCLP19338 710 aaKnown RBP16.74■□□□□ 0.27
SYNCRIP-203ENST00000444272 MGAT3Q09327 533 aa16.74■□□□□ 0.27
SYNCRIP-203ENST00000444272 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
SYNCRIP-203ENST00000444272 FBXO47Q5MNV8 452 aa16.74■□□□□ 0.27
SYNCRIP-203ENST00000444272 MYSM1Q5VVJ2 828 aa16.74■□□□□ 0.27
SYNCRIP-203ENST00000444272 PRR23BQ6ZRT6 265 aa16.74■□□□□ 0.27
SYNCRIP-203ENST00000444272 SEMA4GQ9NTN9 838 aa16.74■□□□□ 0.27
SYNCRIP-203ENST00000444272 LOXHD1Q8IVV2 1947 aa16.74■□□□□ 0.27
SYNCRIP-203ENST00000444272 COL4A3Q01955 1670 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 TMEM8BA6NDV4 472 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 CLASP2O75122 1294 aaKnown RBP16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 TSPY3P0CV98 308 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 TSPY8P0CW00 308 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 SCG2P13521 617 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 CD52P31358 61 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 ATP8B2P98198 1209 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 POLA2Q14181 598 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 TTBK2Q6IQ55 1244 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 TMC5Q6UXY8 1006 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 TSHZ1Q6ZSZ6 1077 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 LURAP1LQ8IV03 231 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 AGO3Q9H9G7 860 aaKnown RBP16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 RAB23Q9ULC3 237 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 RALGAPA1Q6GYQ0 2036 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 PLIN4Q96Q06 1357 aa16.73■□□□□ 0.27
SYNCRIP-203ENST00000444272 C2orf16Q68DN1 1984 aa16.72■□□□□ 0.27
SYNCRIP-203ENST00000444272 TBKBP1A7MCY6 615 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms