RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 NBPF9Q3BBW0 867 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 TMEM67Q5HYA8 995 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 RRP12Q5JTH9 1297 aaKnown RBP8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 TATDN1Q6P1N9 297 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 Q6ZUG5 572 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 TMEM179Q6ZVK1 233 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 GALNT11Q8NCW6 608 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 CORO1BQ9BR76 489 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 EMILIN2Q9BXX0 1053 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 KBTBD4Q9NVX7 518 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 PGAP2Q9UHJ9 254 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 SAP30BPQ9UHR5 308 aaKnown RBP8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 SLC12A7Q9Y666 1083 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 TRPM7Q96QT4 1865 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 TNKSO95271 1327 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 CLRN2A0PK11 232 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 TCP10L2B9ZVM9 353 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 DEAF1O75398 565 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 ASNSP08243 561 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 VEGFAP15692 232 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 PDCP20941 246 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 ARNTP27540 789 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 KIF5BP33176 963 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 EPHX2P34913 555 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 NF2P35240 595 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 NOVP48745 357 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 GNAQP50148 359 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 HMGN5P82970 282 aaKnown RBP8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 CUL4AQ13619 759 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 TOB2Q14106 344 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 RASA3Q14644 834 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 POU4F3Q15319 338 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 CERKLQ49MI3 558 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 TBC1D10BQ4KMP7 808 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 ZNF394Q53GI3 561 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 IFIT1BQ5T764 474 aaKnown RBP8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 NFXL1Q6ZNB6 911 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 ERMP1Q7Z2K6 904 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 CATIPQ7Z7H3 387 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 FBXO11Q86XK2 927 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 FMR1NBQ8N0W7 255 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 FAM177A1Q8N128 213 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 IGDCC4Q8TDY8 1250 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 BRF1Q92994 677 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 SCARF2Q96GP6 870 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 TMX3Q96JJ7 454 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 RSRP1Q9BUV0 290 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 DEFB129Q9H1M3 183 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 SLKQ9H2G2 1235 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 SH2D4AQ9H788 454 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 CCSER2Q9H7U1 834 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 KANSL2Q9H9L4 492 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 CABP5Q9NP86 173 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 RBM28Q9NW13 759 aaKnown RBP8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 GGA3Q9NZ52 723 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 PCDHGB7Q9Y5F8 929 aa8.27□□□□□ -1.09
R3HDM1-210ENST00000443537 FAM181BA6NEQ2 426 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 DDTLA6NHG4 134 aaPredicted RBP8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 DDX3YO15523 660 aaKnown RBP8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 ZBTB43O43298 467 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 CTNND1O60716 968 aaKnown RBP8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 PFKFB2O60825 505 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 TTLL1O95922 423 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 CYP2D6P10635 497 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 TOP1P11387 765 aaKnown RBP8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 MAOBP27338 520 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 SHMT1P34896 483 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 EPS15P42566 896 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 ANTXR2P58335 489 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 TFAP4Q01664 338 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 LRRC14Q15048 493 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 SEC23AQ15436 765 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 ANGEL2Q5VTE6 544 aaKnown RBP8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 RCSD1Q6JBY9 416 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 APOA5Q6Q788 366 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 ENAHQ8N8S7 591 aaPredicted RBP8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 GTF3C6Q969F1 213 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 TMEM74Q96NL1 305 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 LZTS2Q9BRK4 669 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 TAF1DQ9H5J8 278 aaPredicted RBP8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 LY9Q9HBG7 655 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 TLR6Q9Y2C9 796 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 TAF6LQ9Y6J9 622 aa8.26□□□□□ -1.09
R3HDM1-210ENST00000443537 PAPPA2Q9BXP8 1791 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 CYP2D7A0A087X1C5 515 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 KLF18A0A0U1RQI7 1052 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 GOLGA8BA8MQT2 603 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 CPLX1O14810 134 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 SMARCA1P28370 1054 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 METAP2P50579 478 aaKnown RBP eCLIP8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 CACNB3P54284 484 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 ABCB5Q2M3G0 1257 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 LLGL2Q6P1M3 1020 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 CYB5R4Q7L1T6 521 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 CDC37L1Q7L3B6 337 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 ZNF654Q8IZM8 581 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 CTCFLQ8NI51 663 aaPredicted RBP8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 TEPSINQ96N21 525 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 ZNF341Q9BYN7 854 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms