RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ATF2P15336 505 aa24.34■■□□□ 1.49
CTDSPL-206ENST00000443503 MTF1Q14872 753 aa24.34■■□□□ 1.49
CTDSPL-206ENST00000443503 FAM47CQ5HY64 1035 aa24.34■■□□□ 1.49
CTDSPL-206ENST00000443503 PALM2Q8IXS6 379 aa24.34■■□□□ 1.49
CTDSPL-206ENST00000443503 KCNB2Q92953 911 aa24.34■■□□□ 1.49
CTDSPL-206ENST00000443503 KCNH2Q12809 1159 aa24.34■■□□□ 1.49
CTDSPL-206ENST00000443503 RC3H1Q5TC82 1133 aaKnown RBP24.34■■□□□ 1.49
CTDSPL-206ENST00000443503 CCND2P30279 289 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 TFAMQ00059 246 aaKnown RBP24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 KRT81Q14533 505 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 CASP8Q14790 479 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 MIS18BP1Q6P0N0 1132 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 RNF207Q6ZRF8 634 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 NCOA3Q9Y6Q9 1424 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 NR3C1P04150 777 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 APBA1Q02410 837 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 DALRD3Q5D0E6 543 aaKnown RBP24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 SLC27A3Q5K4L6 730 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 FBXO33Q7Z6M2 555 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 PPM1EQ8WY54 764 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 RMDN3Q96TC7 470 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 MTMR4Q9NYA4 1195 aa24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 ORC2Q13416 577 aaPredicted RBP24.33■■□□□ 1.49
CTDSPL-206ENST00000443503 ATP8A1Q9Y2Q0 1164 aa24.33■■□□□ 1.48
CTDSPL-206ENST00000443503 FLT1P17948 1338 aa24.33■■□□□ 1.48
CTDSPL-206ENST00000443503 HPS3Q969F9 1004 aa24.32■■□□□ 1.48
CTDSPL-206ENST00000443503 TRIM9Q9C026 710 aa24.32■■□□□ 1.48
CTDSPL-206ENST00000443503 PHLDB2Q86SQ0 1253 aa24.32■■□□□ 1.48
CTDSPL-206ENST00000443503 TUBE1Q9UJT0 475 aa24.32■■□□□ 1.48
CTDSPL-206ENST00000443503 C10orf76Q5T2E6 689 aa24.32■■□□□ 1.48
CTDSPL-206ENST00000443503 CCSER1Q9C0I3 900 aa24.32■■□□□ 1.48
CTDSPL-206ENST00000443503 KSR1Q8IVT5 923 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 CACNA2D3Q8IZS8 1091 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 BANK1Q8NDB2 785 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 FAM114A2Q9NRY5 505 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 ZNF131P52739 623 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 P3H4Q92791 437 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 MXD3Q9BW11 206 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 CEP72Q9P209 647 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 SNX1Q13596 522 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 SESTD1Q86VW0 696 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 DYDC2Q96IM9 177 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 AP1M1Q9BXS5 423 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 RAVER2Q9HCJ3 691 aaKnown RBP24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 TYW1Q9NV66 732 aaKnown RBP24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 SLC5A4Q9NY91 659 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 DNAJC12Q9UKB3 198 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 TMEM131LA2VDJ0 1609 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 GOLGA8SH3BPF8 625 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 GPR162Q16538 588 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 CCDC110Q8TBZ0 833 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 PBKQ96KB5 322 aa24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 NXF1Q9UBU9 619 aaKnown RBP24.31■■□□□ 1.48
CTDSPL-206ENST00000443503 MTMR1Q13613 665 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 TFDP1Q14186 410 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 SPATA31D1Q6ZQQ2 1576 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 MEGF6O75095 1541 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 UBE2Q2LH0YL09 131 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 PRELPP51888 382 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 GRIN1Q05586 938 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 PADI6Q6TGC4 694 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 K7ERI5 159 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 PSAPP07602 524 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 OSTNP61366 133 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 SGO2Q562F6 1265 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 CCDC13Q8IYE1 715 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 ENGASEQ8NFI3 743 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 APOL6Q9BWW8 343 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 IRX2Q9BZI1 471 aaPredicted RBP24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 EPC1Q9H2F5 836 aa24.3■■□□□ 1.48
CTDSPL-206ENST00000443503 CCT5P48643 541 aa24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 HACE1Q8IYU2 909 aa24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 JPH2Q9BR39 696 aaPredicted RBP24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 DHX9Q08211 1270 aaKnown RBP24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 DPP9Q86TI2 863 aa24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 ZNF277Q9NRM2 450 aaPredicted RBP24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 PPLO60437 1756 aa24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 BUB1BO60566 1050 aaPredicted RBP24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 RASA1P20936 1047 aa24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 IFNAR2P48551 515 aa24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 KCNB1Q14721 858 aa24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 VPS72Q15906 364 aa24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 KNOP1Q1ED39 458 aaKnown RBP24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 AKT3Q9Y243 479 aa24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 MYO3BQ8WXR4 1341 aa24.29■■□□□ 1.48
CTDSPL-206ENST00000443503 GFPT1Q06210 699 aaPredicted RBP24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 ALCAMQ13740 583 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 GKAP1Q5VSY0 366 aaPredicted RBP24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 E4F1Q66K89 784 aaPredicted RBP24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 ANKRD40Q6AI12 368 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 CCZ1BP86790 482 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 CCZ1P86791 482 aaPredicted RBP24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 ZNF543Q08ER8 600 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 MAP7D1Q3KQU3 841 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 STMN2Q93045 179 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 CAPN9O14815 690 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 PALMO75781 387 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 GCLMP48507 274 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 ZBTB33Q86T24 672 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 CCDC125Q86Z20 511 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms