RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 FAM170AA1A519 330 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 CFLARO15519 480 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 ORC4O43929 436 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 STK10O94804 968 aaKnown RBP11.09□□□□□ -0.63
LIN54-202ENST00000442461 SCG2P13521 617 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 GSTT1P30711 240 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 BTKQ06187 659 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 TRIP10Q15642 601 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 AKNAD1Q5T1N1 836 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 HAUS3Q68CZ6 603 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 MIGA1Q8NAN2 632 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 MAGEC3Q8TD91 643 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 AGAP11Q8TF27 550 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 PHF23Q9BUL5 403 aaPredicted RBP11.09□□□□□ -0.63
LIN54-202ENST00000442461 ATXN10Q9UBB4 475 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 PITPNM2Q9BZ72 1349 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 LIN7AO14910 233 aaPredicted RBP11.09□□□□□ -0.63
LIN54-202ENST00000442461 YWHAGP61981 247 aaKnown RBP eCLIP11.09□□□□□ -0.63
LIN54-202ENST00000442461 DSG1Q02413 1049 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 HIC1Q14526 733 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 DCUN1D2Q6PH85 259 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 MCF2L2Q86YR7 1114 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 UPF3AQ9H1J1 476 aaKnown RBP11.09□□□□□ -0.63
LIN54-202ENST00000442461 ALDH8A1Q9H2A2 487 aaPredicted RBP11.09□□□□□ -0.63
LIN54-202ENST00000442461 TMBIM4Q9HC24 238 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 GALNT8Q9NY28 637 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.09□□□□□ -0.63
LIN54-202ENST00000442461 GPATCH8Q9UKJ3 1502 aaKnown RBP11.09□□□□□ -0.63
LIN54-202ENST00000442461 CFAP43Q8NDM7 1665 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 IPO5O00410 1097 aaKnown RBP11.09□□□□□ -0.63
LIN54-202ENST00000442461 EXOC3O60645 756 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 BAG3O95817 575 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 MMP1P03956 469 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 NCF2P19878 526 aaPredicted RBP11.09□□□□□ -0.63
LIN54-202ENST00000442461 HSD17B3P37058 310 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 ERFP50548 548 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 ART3Q13508 389 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 CASC4Q6P4E1 433 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 ENGASEQ8NFI3 743 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 C17orf50Q8WW18 174 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 ISCUQ9H1K1 167 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 GIMAP4Q9NUV9 329 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 ATP6V1B1P15313 513 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 KCNA4P22459 653 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 BFSP1Q12934 665 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 DNAL1Q4LDG9 190 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 DDI1Q8WTU0 396 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 TTC17Q96AE7 1141 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 GDAQ9Y2T3 454 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 PCDHB6Q9Y5E3 794 aa11.09□□□□□ -0.63
LIN54-202ENST00000442461 O00370 1275 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 NOP56O00567 594 aaKnown RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 SERPINI2O75830 405 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 APOA1P02647 267 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 LDHCP07864 332 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 PLS3P13797 630 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 HDAC4P56524 1084 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 TMPRSS15P98073 1019 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 TBL3Q12788 808 aaKnown RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 SHC4Q6S5L8 630 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 METTL16Q86W50 562 aaKnown RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 ZSCAN29Q8IWY8 852 aaPredicted RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 CAVIN3Q969G5 261 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 RAB20Q9NX57 234 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 LIMA1Q9UHB6 759 aaKnown RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 MAP3K19Q56UN5 1328 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 SYNGAP1Q96PV0 1343 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 NLRP1Q9C000 1473 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 SRRM3A6NNA2 597 aaPredicted RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 ATP6V1G1O75348 118 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 MAP3K7CLP57077 242 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 GFPT1Q06210 699 aaPredicted RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 NR5A1Q13285 461 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 DCTN2Q13561 401 aaKnown RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 RPS6KA2Q15349 733 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 PDXDC1Q6P996 788 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 MAEAQ7L5Y9 396 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 CMTR1Q8N1G2 835 aaKnown RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 CCT6BQ92526 530 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 CCDC124Q96CT7 223 aaKnown RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 MS4A14Q96JA4 679 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 AIFM3Q96NN9 605 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 MTRQ99707 1265 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 FAM129AQ9BZQ8 928 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 APOBEC2Q9Y235 224 aaKnown RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 LEMD3Q9Y2U8 911 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 LRRC53A6NM62 1247 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 MIF4GDA9UHW6 222 aaKnown RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 GPC4O75487 556 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 RTN3O95197 1032 aaPredicted RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 SYF2O95926 243 aaKnown RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 RBM5P52756 815 aaKnown RBP eCLIP11.08□□□□□ -0.64
LIN54-202ENST00000442461 CAV1Q03135 178 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 CALCRLQ16602 461 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 WDR44Q5JSH3 913 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 PAPD7Q5XG87 772 aaKnown RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 CENPUQ71F23 418 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 BLIDQ8IZY5 108 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 DACT3Q96B18 629 aaPredicted RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 MPP4Q96JB8 637 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms