RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 PRDM5Q9NQX1 630 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-209ENST00000441871 PDLIM7Q9NR12 457 aa4.4□□□□□ -1.71
R3HDM1-209ENST00000441871 NSMCE4AQ9NXX6 385 aa4.4□□□□□ -1.71
R3HDM1-209ENST00000441871 CABP1Q9NZU7 370 aa4.4□□□□□ -1.71
R3HDM1-209ENST00000441871 CALCOCO1Q9P1Z2 691 aa4.4□□□□□ -1.71
R3HDM1-209ENST00000441871 EIF2B4Q9UI10 523 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-209ENST00000441871 CHIC2Q9UKJ5 165 aa4.4□□□□□ -1.71
R3HDM1-209ENST00000441871 HPCAL4Q9UM19 191 aa4.4□□□□□ -1.71
R3HDM1-209ENST00000441871 LOC102724428A0A0B4J2F2 783 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 A8MVJ9 347 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 LACTBL1A8MY62 500 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 MINDY4BA8MYZ0 360 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 HNRNPCL2B2RXH8 293 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 B4E171 279 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 H0Y626 953 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 M0R2N6 131 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 OPLAHO14841 1288 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 SLC7A4O43246 635 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 NMT2O60551 498 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 CTNND1O60716 968 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 HNRNPCL1O60812 293 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 ZBED4O75132 1171 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 TSC22D2O75157 780 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 RTN2O75298 545 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 USP1O94782 785 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 GOSR1O95249 250 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 GJB6O95452 261 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 TBC1D8O95759 1140 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 STAU1O95793 577 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 TOP1P11387 765 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 CCND1P24385 295 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 MSX1P28360 303 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 EIF4A3P38919 411 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 HNF4AP41235 474 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 NOP2P46087 812 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 MAP2K3P46734 347 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 GTF2A1P52655 376 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 SIK1P57059 783 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 KRT76Q01546 638 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 SPARCL1Q14515 664 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 ODF1Q14990 250 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 MEA1Q16626 185 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 ZNF423Q2M1K9 1284 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 GNPTABQ3T906 1256 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 MMEL1Q495T6 779 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 TTC19Q6DKK2 380 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 MCTP2Q6DN12 878 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 CCDC81Q6ZN84 652 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 BICDL1Q6ZP65 573 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 CCDC91Q7Z6B0 441 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 DNAJB7Q7Z6W7 309 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 LRRTM3Q86VH5 581 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 SPATA2LQ8IUW3 424 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 COLGALT2Q8IYK4 626 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 LINC00469Q8N7U9 141 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 NEDD1Q8NHV4 660 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 SLC30A5Q8TAD4 765 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 OTUD7AQ8TE49 926 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 ZNF296Q8WUU4 475 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 TEKT4Q8WW24 435 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 HPS3Q969F9 1004 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 CHFRQ96EP1 664 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 BICD1Q96G01 975 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 C8orf76Q96K31 380 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 FSD1Q9BTV5 496 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 DHRS4Q9BTZ2 278 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 RSRP1Q9BUV0 290 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 YIPF2Q9BWQ6 316 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 NT5C1AQ9BXI3 368 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 OSBPL7Q9BZF2 842 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 SEMA4AQ9H3S1 761 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 NCOR1P1Q9H4R4 102 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 RUBCNLQ9H714 662 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 VCPKMTQ9H867 229 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 EHMT1Q9H9B1 1298 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 RSAD1Q9HA92 442 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 XAB2Q9HCS7 855 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 PLSCR4Q9NRQ2 329 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 CWC15Q9P013 229 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 SPATA7Q9P0W8 599 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 CCDC39Q9UFE4 941 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 ZC3H7BQ9UGR2 993 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 PPT2Q9UMR5 302 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 SUFUQ9UMX1 484 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 JAG2Q9Y219 1238 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 LRCH1Q9Y2L9 728 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 JRKLQ9Y4A0 524 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 TACC3Q9Y6A5 838 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 SCRIBQ14160 1630 aa4.39□□□□□ -1.71
R3HDM1-209ENST00000441871 KRBA1A5PL33 1030 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 BTBD11A6QL63 1104 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 AP3B1O00203 1094 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 CDK2AP1O14519 115 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 STX6O43752 255 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 ZNF254O75437 659 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 SNUPNO95149 360 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 EPN2O95208 641 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 TBX18O95935 607 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 SLURP2P0DP57 97 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms