RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ZNF496Q96IT1 587 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 CSRNP2Q9H175 543 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 SMOC1Q9H4F8 434 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 SP110Q9HB58 689 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 GTF2IRD1Q9UHL9 959 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 SERPINB13Q9UIV8 391 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 WTIPA6NIX2 430 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 MAN2B1O00754 1011 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 SCDO00767 359 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 NBNO60934 754 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 ITGB2P05107 769 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 POU2F2P09086 479 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 TMEM253P0C7T8 217 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 AGXTP21549 392 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 NOS3P29474 1203 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 DEKP35659 375 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 IREB2P48200 963 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 GTF2A2P52657 109 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 POU5F1BQ06416 359 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 CHAF1AQ13111 956 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 STK3Q13188 491 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 LONRF1Q17RB8 773 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 C1orf228Q6PIY5 440 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 FRMD7Q6ZUT3 714 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 CEP68Q76N32 757 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 TSPYL5Q86VY4 417 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 GRAMD1CQ8IYS0 662 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 ANKRD42Q8N9B4 389 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 FAM156AQ8NDB6 213 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 RTF1Q92541 710 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 LENG1Q96BZ8 264 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 KLRG2A4D1S0 409 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 TBC1D8O95759 1140 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 IGHA1P01876 353 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 ALDH5A1P51649 535 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 AK2P54819 239 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 FOXD4Q12950 439 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 SEC23AQ15436 765 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 UVSSAQ2YD98 709 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 TOR2AQ5JU69 321 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 OVCH2Q7RTZ1 564 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 FAM20CQ8IXL6 584 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 FAM186BQ8IYM0 893 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 IFNL2Q8IZJ0 200 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 GIMAP7Q8NHV1 300 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 PPP1R35Q8TAP8 253 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 IPO4Q8TEX9 1081 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 GATA6Q92908 595 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 KCNF1Q9H3M0 494 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 ZNF277Q9NRM2 450 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 MSRAQ9UJ68 235 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 TUBD1Q9UJT1 453 aa5.06□□□□□ -1.6
CDC42BPA-207ENST00000441725 TMEM82A0PJX8 343 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 HMGB1P1B2RPK0 211 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 HIP1RO75146 1068 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 ZBED1O96006 694 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 ENPP1P22413 925 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 HALP42357 657 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 MTNR1BP49286 362 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 ADKP55263 362 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 PRRT3Q5FWE3 981 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 HABP4Q5JVS0 413 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 CDKAL1Q5VV42 579 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 OTOP3Q7RTS5 596 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 SRGAP1Q7Z6B7 1085 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 NAT16Q8N8M0 369 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 WFDC12Q8WWY7 111 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 ACAP3Q96P50 834 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 FAM193BQ96PV7 902 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 NAP1L4Q99733 375 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 QRSL1Q9H0R6 528 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 TRIT1Q9H3H1 467 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 SEMA4AQ9H3S1 761 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 CASS4Q9NQ75 786 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 LUZP4Q9P127 313 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 EDARQ9UNE0 448 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 PCDHGB6Q9Y5F9 930 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 GPR45Q9Y5Y3 372 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 B3GALT1Q9Y5Z6 326 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 U3KQE9 123 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 ABHD14A-ACY1A0A1B0GW23 586 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 SSU72P8A0A1W2PR75 194 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 GNAT3A8MTJ3 354 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 FAM155AB1AL88 458 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 IGF2BP3O00425 579 aaKnown RBP eCLIP5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 NDUFS2O75306 463 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 CLEC2LP0C7M8 214 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 CD53P19397 219 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 CD40P25942 277 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 ADMP35318 185 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 FSCN1Q16658 493 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 PAOXQ6QHF9 649 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 CCDC149Q6ZUS6 474 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 SIRT2Q8IXJ6 389 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 TMEM52Q8NDY8 209 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 MYD88Q99836 296 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 CD244Q9BZW8 370 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 FAM204AQ9H8W3 233 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 ERVK13-1Q9NX77 482 aa5.05□□□□□ -1.6
CDC42BPA-207ENST00000441725 MARCH2Q9P0N8 246 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms