RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 AREL1O15033 823 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 DIAPH2O60879 1101 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 PECAM1P16284 738 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-206ENST00000441438 CCNA1P78396 465 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 PDE3AQ14432 1141 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 ODF1Q14990 250 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 CLUL1Q15846 466 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 ANGPTL8Q6UXH0 198 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 CTNNBL1Q8WYA6 563 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-206ENST00000441438 MIEF2Q96C03 454 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 RBCK1Q9BYM8 510 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 NACAP1Q9BZK3 213 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 FOXP3Q9BZS1 431 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 KLHL11Q9NVR0 708 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 IL1RAPL1Q9NZN1 696 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 DDX20Q9UHI6 824 aaKnown RBP11.59□□□□□ -0.55
SYNE2-206ENST00000441438 WDR37Q9Y2I8 494 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 ARHGEF10O15013 1369 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 ITIH6Q6UXX5 1313 aa11.59□□□□□ -0.55
SYNE2-206ENST00000441438 SOCS5O75159 536 aa11.58□□□□□ -0.55
SYNE2-206ENST00000441438 FGFR4P22455 802 aa11.58□□□□□ -0.55
SYNE2-206ENST00000441438 MNAT1P51948 309 aa11.58□□□□□ -0.55
SYNE2-206ENST00000441438 FKBP4Q02790 459 aaKnown RBP eCLIP11.58□□□□□ -0.55
SYNE2-206ENST00000441438 PSMD6Q15008 389 aa11.58□□□□□ -0.55
SYNE2-206ENST00000441438 CCDC183Q5T5S1 534 aa11.58□□□□□ -0.55
SYNE2-206ENST00000441438 CORO6Q6QEF8 472 aa11.58□□□□□ -0.55
SYNE2-206ENST00000441438 TCEANC2Q96MN5 208 aa11.58□□□□□ -0.55
SYNE2-206ENST00000441438 CORO1BQ9BR76 489 aa11.58□□□□□ -0.55
SYNE2-206ENST00000441438 NDFIP2Q9NV92 336 aa11.58□□□□□ -0.55
SYNE2-206ENST00000441438 AATFQ9NY61 560 aaKnown RBP eCLIP11.58□□□□□ -0.55
SYNE2-206ENST00000441438 CROTQ9UKG9 612 aa11.58□□□□□ -0.55
SYNE2-206ENST00000441438 PCDHB3Q9Y5E6 796 aa11.58□□□□□ -0.55
SYNE2-206ENST00000441438 NCAPD2Q15021 1401 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 A8MVJ9 347 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 TNFRSF21O75509 655 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 S100A6P06703 90 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 TOP1P11387 765 aaKnown RBP11.58□□□□□ -0.56
SYNE2-206ENST00000441438 EPS15P42566 896 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 ITKQ08881 620 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 BBOF1Q8ND07 529 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 TRIM58Q8NG06 486 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 DNAAF4Q8WXU2 420 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 DDX11Q96FC9 970 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 MFSD14AQ96MC6 490 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 TBC1D32Q96NH3 1257 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 BICC1Q9H694 974 aaKnown RBP11.58□□□□□ -0.56
SYNE2-206ENST00000441438 CAAP1Q9H8G2 361 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 GGT7Q9UJ14 662 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 GRID1Q9ULK0 1009 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 STMN1P16949 149 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 RPS6KB1P23443 525 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 MCM4P33991 863 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 PPIDQ08752 370 aaKnown RBP11.58□□□□□ -0.56
SYNE2-206ENST00000441438 OSTM1Q86WC4 334 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 VSIG1Q86XK7 387 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 SCG3Q8WXD2 468 aaKnown RBP11.58□□□□□ -0.56
SYNE2-206ENST00000441438 SHC3Q92529 594 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 ASB2Q96Q27 587 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 PI4K2AQ9BTU6 479 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 PRKD2Q9BZL6 878 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 SLC5A4Q9NY91 659 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 MSRB2Q9Y3D2 182 aa11.58□□□□□ -0.56
SYNE2-206ENST00000441438 ABLIM3O94929 683 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 HSPA4LO95757 839 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 OLFM2O95897 454 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 EHHADHQ08426 723 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 NFIAQ12857 509 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 SLC41A1Q8IVJ1 513 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 MIPOL1Q8TD10 442 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 CRLF2Q9HC73 371 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 VPS45Q9NRW7 570 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 HPF1Q9NWY4 346 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 ATP11BQ9Y2G3 1177 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 GPR75-ASB3A0A0A6YYF3 556 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 TSPAN1O60635 241 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 DDHD2O94830 711 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 CYP11A1P05108 521 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 SOX11P35716 441 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 SLC16A2P36021 539 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 ARFIP1P53367 373 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 NUP54Q7Z3B4 507 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 LRRC59Q96AG4 307 aaKnown RBP11.57□□□□□ -0.56
SYNE2-206ENST00000441438 RGS17Q9UGC6 210 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-206ENST00000441438 TNS3Q68CZ2 1445 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 CPDO75976 1380 aa11.57□□□□□ -0.56
SYNE2-206ENST00000441438 UQCRHLA0A096LP55 91 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 SLC12A8A0AV02 714 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 PDE8AO60658 829 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 LARGE1O95461 756 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 UQCRHP07919 91 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 SLFN14P0C7P3 912 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 TCEA2Q15560 299 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 ATP2B3Q16720 1220 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 SHQ1Q6PI26 577 aaKnown RBP11.56□□□□□ -0.56
SYNE2-206ENST00000441438 LRP10Q7Z4F1 713 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 TMEM57Q8N5G2 664 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 SMYD1Q8NB12 490 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 OTUD7AQ8TE49 926 aaPredicted RBP11.56□□□□□ -0.56
SYNE2-206ENST00000441438 CCT6BQ92526 530 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 RMDN3Q96TC7 470 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms