RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 SLC26A2P50443 739 aa25.43■■□□□ 1.66
CNOT3-203ENST00000440571 JAK3P52333 1124 aa25.43■■□□□ 1.66
CNOT3-203ENST00000440571 PDXDC2PQ6P474 469 aa25.43■■□□□ 1.66
CNOT3-203ENST00000440571 POTEDQ86YR6 584 aa25.43■■□□□ 1.66
CNOT3-203ENST00000440571 SLFN12Q8IYM2 578 aa25.43■■□□□ 1.66
CNOT3-203ENST00000440571 AFAP1L1Q8TED9 768 aa25.43■■□□□ 1.66
CNOT3-203ENST00000440571 ATP6V0A1Q93050 837 aa25.43■■□□□ 1.66
CNOT3-203ENST00000440571 NOC4LQ9BVI4 516 aaKnown RBP25.43■■□□□ 1.66
CNOT3-203ENST00000440571 NRCAMQ92823 1304 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 ALPK3Q96L96 1907 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 NEMFO60524 1076 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 PDCP20941 246 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 HIC1Q14526 733 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 CALCRLQ16602 461 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 MFSD5Q6N075 450 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 MIER3Q7Z3K6 550 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 CCDC60Q8IWA6 550 aaPredicted RBP25.42■■□□□ 1.66
CNOT3-203ENST00000440571 TMEM199Q8N511 208 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 RETREG2Q8NC44 543 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 HAS1Q92839 578 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 UBE2OQ9C0C9 1292 aaKnown RBP25.42■■□□□ 1.66
CNOT3-203ENST00000440571 GABBR1Q9UBS5 961 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 SCN10AQ9Y5Y9 1956 aa25.42■■□□□ 1.66
CNOT3-203ENST00000440571 WNT7AO00755 349 aa25.41■■□□□ 1.66
CNOT3-203ENST00000440571 MCM7P33993 719 aa25.41■■□□□ 1.66
CNOT3-203ENST00000440571 BMP8BP34820 402 aa25.41■■□□□ 1.66
CNOT3-203ENST00000440571 TRAPPC10P48553 1259 aa25.41■■□□□ 1.66
CNOT3-203ENST00000440571 PPFIA1Q13136 1202 aa25.41■■□□□ 1.66
CNOT3-203ENST00000440571 PTK7Q13308 1070 aa25.41■■□□□ 1.66
CNOT3-203ENST00000440571 BFSP2Q13515 415 aa25.41■■□□□ 1.66
CNOT3-203ENST00000440571 PLCB4Q15147 1175 aa25.41■■□□□ 1.66
CNOT3-203ENST00000440571 ZNF174Q15697 407 aa25.41■■□□□ 1.66
CNOT3-203ENST00000440571 CKAP2LQ8IYA6 745 aa25.41■■□□□ 1.66
CNOT3-203ENST00000440571 RDM1Q8NG50 284 aa25.41■■□□□ 1.66
CNOT3-203ENST00000440571 TRPC6Q9Y210 931 aa25.41■■□□□ 1.66
CNOT3-203ENST00000440571 COLQQ9Y215 455 aaPredicted RBP25.41■■□□□ 1.66
CNOT3-203ENST00000440571 POTEB3A0JP26 581 aa25.4■■□□□ 1.66
CNOT3-203ENST00000440571 CCL23P55773 120 aa25.4■■□□□ 1.66
CNOT3-203ENST00000440571 TTC38Q5R3I4 469 aa25.4■■□□□ 1.66
CNOT3-203ENST00000440571 POTEBQ6S5H4 581 aa25.4■■□□□ 1.66
CNOT3-203ENST00000440571 CCDC155Q8N6L0 562 aa25.4■■□□□ 1.66
CNOT3-203ENST00000440571 CTAGE1Q96RT6 745 aa25.4■■□□□ 1.66
CNOT3-203ENST00000440571 MAFBQ9Y5Q3 323 aaPredicted RBP25.4■■□□□ 1.66
CNOT3-203ENST00000440571 RRN3P2A6NIE6 340 aa25.39■■□□□ 1.66
CNOT3-203ENST00000440571 TREHO43280 583 aa25.39■■□□□ 1.66
CNOT3-203ENST00000440571 INSRRP14616 1297 aa25.39■■□□□ 1.66
CNOT3-203ENST00000440571 HOXC8P31273 242 aa25.39■■□□□ 1.66
CNOT3-203ENST00000440571 FPGSQ05932 587 aa25.39■■□□□ 1.66
CNOT3-203ENST00000440571 PPP2R5CQ13362 524 aa25.39■■□□□ 1.66
CNOT3-203ENST00000440571 GRIK4Q16099 956 aa25.39■■□□□ 1.66
CNOT3-203ENST00000440571 B3GNT9Q6UX72 402 aa25.39■■□□□ 1.66
CNOT3-203ENST00000440571 PCDHA12Q9UN75 941 aa25.39■■□□□ 1.66
CNOT3-203ENST00000440571 UMODL1Q5DID0 1318 aa25.38■■□□□ 1.65
CNOT3-203ENST00000440571 HBP1O60381 514 aa25.38■■□□□ 1.65
CNOT3-203ENST00000440571 HSP90AA1P07900 732 aaKnown RBP25.38■■□□□ 1.65
CNOT3-203ENST00000440571 TXKP42681 527 aa25.38■■□□□ 1.65
CNOT3-203ENST00000440571 IGBP1P78318 339 aa25.38■■□□□ 1.65
CNOT3-203ENST00000440571 ORC2Q13416 577 aaPredicted RBP25.38■■□□□ 1.65
CNOT3-203ENST00000440571 CAGE1Q8TC20 777 aa25.38■■□□□ 1.65
CNOT3-203ENST00000440571 ATP8B4Q8TF62 1192 aa25.38■■□□□ 1.65
CNOT3-203ENST00000440571 LMBR1Q8WVP7 490 aa25.38■■□□□ 1.65
CNOT3-203ENST00000440571 MTMR9Q96QG7 549 aa25.38■■□□□ 1.65
CNOT3-203ENST00000440571 VAV3Q9UKW4 847 aa25.38■■□□□ 1.65
CNOT3-203ENST00000440571 PITPNM1O00562 1244 aa25.37■■□□□ 1.65
CNOT3-203ENST00000440571 ATP4AP20648 1035 aa25.37■■□□□ 1.65
CNOT3-203ENST00000440571 ADAM17P78536 824 aa25.37■■□□□ 1.65
CNOT3-203ENST00000440571 TRMT1LQ7Z2T5 733 aaKnown RBP25.37■■□□□ 1.65
CNOT3-203ENST00000440571 SERINC5Q86VE9 423 aa25.37■■□□□ 1.65
CNOT3-203ENST00000440571 DHX38Q92620 1227 aaKnown RBP25.37■■□□□ 1.65
CNOT3-203ENST00000440571 TMEM60Q9H2L4 133 aa25.37■■□□□ 1.65
CNOT3-203ENST00000440571 PRO3102Q9H379 93 aa25.37■■□□□ 1.65
CNOT3-203ENST00000440571 NRBP2Q9NSY0 501 aa25.37■■□□□ 1.65
CNOT3-203ENST00000440571 VPS37CA5D8V6 355 aaPredicted RBP25.36■■□□□ 1.65
CNOT3-203ENST00000440571 EML1O00423 815 aa25.36■■□□□ 1.65
CNOT3-203ENST00000440571 CSF2RAP15509 400 aa25.36■■□□□ 1.65
CNOT3-203ENST00000440571 TOB1P50616 345 aaPredicted RBP25.36■■□□□ 1.65
CNOT3-203ENST00000440571 PPIGQ13427 754 aaKnown RBP eCLIP25.36■■□□□ 1.652e-7■■□□□ 11.7
CNOT3-203ENST00000440571 TTC12Q9H892 705 aaPredicted RBP25.36■■□□□ 1.65
CNOT3-203ENST00000440571 IQCF3P0C7M6 154 aa25.35■■□□□ 1.65
CNOT3-203ENST00000440571 SYT1P21579 422 aa25.35■■□□□ 1.65
CNOT3-203ENST00000440571 NCAPH2Q6IBW4 605 aa25.35■■□□□ 1.65
CNOT3-203ENST00000440571 BBXQ8WY36 941 aaPredicted RBP25.35■■□□□ 1.65
CNOT3-203ENST00000440571 SCLYQ96I15 445 aa25.35■■□□□ 1.65
CNOT3-203ENST00000440571 FAM167AQ96KS9 214 aa25.35■■□□□ 1.65
CNOT3-203ENST00000440571 WNT8AQ9H1J5 351 aa25.35■■□□□ 1.65
CNOT3-203ENST00000440571 DOCK5Q9H7D0 1870 aa25.34■■□□□ 1.65
CNOT3-203ENST00000440571 CEP290O15078 2479 aa25.34■■□□□ 1.65
CNOT3-203ENST00000440571 CKBP12277 381 aa25.34■■□□□ 1.65
CNOT3-203ENST00000440571 SELPP16109 830 aa25.34■■□□□ 1.65
CNOT3-203ENST00000440571 THPOP40225 353 aa25.34■■□□□ 1.65
CNOT3-203ENST00000440571 NBR1Q14596 966 aa25.34■■□□□ 1.65
CNOT3-203ENST00000440571 EPHA7Q15375 998 aa25.34■■□□□ 1.65
CNOT3-203ENST00000440571 TRIM71Q2Q1W2 868 aaKnown RBP25.34■■□□□ 1.65
CNOT3-203ENST00000440571 RILPL1Q5EBL4 403 aa25.34■■□□□ 1.65
CNOT3-203ENST00000440571 ZNF484Q5JVG2 852 aa25.34■■□□□ 1.65
CNOT3-203ENST00000440571 MARCH8Q5T0T0 291 aa25.34■■□□□ 1.65
CNOT3-203ENST00000440571 RPUSD2Q8IZ73 545 aaKnown RBP25.34■■□□□ 1.65
CNOT3-203ENST00000440571 TUBE1Q9UJT0 475 aa25.34■■□□□ 1.65
CNOT3-203ENST00000440571 PCDHB6Q9Y5E3 794 aa25.34■■□□□ 1.65
CNOT3-203ENST00000440571 MBLAC1A4D2B0 266 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms