RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 NLRP12P59046 1061 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PLCB2Q00722 1185 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 SP4Q02446 784 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 MTMR1Q13613 665 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 LRRC26Q2I0M4 334 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 LONRF3Q496Y0 759 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 CEP55Q53EZ4 464 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 CELF3Q5SZQ8 465 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 DHX37Q8IY37 1157 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PDILTQ8N807 584 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PPP1R13LQ8WUF5 828 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 ERCC4Q92889 916 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 GPRASP2Q96D09 838 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 IGLV3-22A0A075B6J6 115 aa16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 BECN2A8MW95 431 aa16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 MMP3P08254 477 aa16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 CAPN2P17655 700 aa16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PSMC6P62333 389 aa16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 MLLT1Q03111 559 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PNOCQ13519 176 aa16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 POSTNQ15063 836 aa16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 C11orf57Q6ZUT1 292 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 CYFIP1Q7L576 1253 aa16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 LUZP1Q86V48 1076 aa16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 RASSF8Q8NHQ8 419 aa16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 TSEN34Q9BSV6 310 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 AGO4Q9HCK5 861 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 KCNH7Q9NS40 1196 aa16.32■□□□□ 0.2
TNFRSF1A-204ENST00000440083 A6NJR5 290 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 MEIS1O00470 390 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 BIN1O00499 593 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 ACTN4O43707 911 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 SMC2O95347 1197 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 TDP2O95551 362 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 TPM4P67936 248 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 ITGB3BPQ13352 177 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 TMEM266Q2M3C6 531 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 HSDL1Q3SXM5 330 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PRR16Q569H4 304 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 KCNV1Q6PIU1 500 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PLA2G4DQ86XP0 818 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 C4orf32Q8N8J7 132 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PCSK9Q8NBP7 692 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 SMARCE1Q969G3 411 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 EMID1Q96A84 441 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 EPSTI1Q96J88 318 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 SPATA33Q96N06 139 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 TUBE1Q9UJT0 475 aa16.31■□□□□ 0.2
TNFRSF1A-204ENST00000440083 MOXD2PA6NHM9 499 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PTMAP06454 111 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 ZNF286BP0CG31 522 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 TGFB3P10600 412 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 GCFC2P16383 781 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 CPT1AP50416 773 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PURAQ00577 322 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 LAMC2Q13753 1193 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 CALCRLQ16602 461 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 METTL7BQ6UX53 244 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 SLC39A5Q6ZMH5 540 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 USP49Q70CQ1 688 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 IQUBQ8NA54 791 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PPTC7Q8NI37 304 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 GJA10Q969M2 543 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 LENG9Q96B70 501 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PDLIM2Q96JY6 352 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 AK8Q96MA6 479 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 TMEM60Q9H2L4 133 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 MLXIPQ9HAP2 919 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 CCDC39Q9UFE4 941 aa16.3■□□□□ 0.2
TNFRSF1A-204ENST00000440083 GRIN2DO15399 1336 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 DDX39AO00148 427 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 ZEB2O60315 1214 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 ADCY5O95622 1261 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 SLFN14P0C7P3 912 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 CIITAP33076 1130 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 STAT6P42226 847 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 RTP1P59025 263 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 CHMP4BP1P59074 171 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 NEDD9Q14511 834 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 TRIM60Q495X7 471 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 NIPA1Q7RTP0 329 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 VTI1AQ96AJ9 217 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 CDHR1Q96JP9 859 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 SENP7Q9BQF6 1050 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 BPIFA3Q9BQP9 254 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 RAB34Q9BZG1 259 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 STARD7Q9NQZ5 370 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 DACH1Q9UI36 760 aa16.29■□□□□ 0.2
TNFRSF1A-204ENST00000440083 A0A087WWV3 80 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 SLC37A4O43826 429 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 MARCH6O60337 910 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 UBA7P41226 1012 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 USP11P51784 963 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 IL17AQ16552 155 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 DPCR1Q3MIW9 517 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 TRIM50Q86XT4 487 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 POTEDQ86YR6 584 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 C7orf61Q8IZ16 206 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 AOPEPQ8N6M6 819 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 TRIML1Q8N9V2 468 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms