RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 MRPL12P52815 198 aaKnown RBP18.04■□□□□ 0.48
CLCNKA-203ENST00000439316 POLR2FP61218 127 aaKnown RBP18.04■□□□□ 0.48
CLCNKA-203ENST00000439316 PPFIA1Q13136 1202 aa18.04■□□□□ 0.48
CLCNKA-203ENST00000439316 CCDC65Q8IXS2 484 aa18.04■□□□□ 0.48
CLCNKA-203ENST00000439316 GJA10Q969M2 543 aa18.04■□□□□ 0.48
CLCNKA-203ENST00000439316 GMLQ99445 158 aa18.04■□□□□ 0.48
CLCNKA-203ENST00000439316 NAP1L4Q99733 375 aaKnown RBP18.04■□□□□ 0.48
CLCNKA-203ENST00000439316 KCTD10Q9H3F6 313 aa18.04■□□□□ 0.48
CLCNKA-203ENST00000439316 PCDHA12Q9UN75 941 aa18.04■□□□□ 0.48
CLCNKA-203ENST00000439316 CXCL9Q07325 125 aa18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 TCP10Q12799 353 aa18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 SLC18A3Q16572 532 aa18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 TTBK2Q6IQ55 1244 aa18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 GBP6Q6ZN66 633 aa18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 ZFPM1Q8IX07 1006 aa18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 JDP2Q8WYK2 163 aa18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 ZFP91Q96JP5 570 aaPredicted RBP18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 PRMT6Q96LA8 375 aaPredicted RBP18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 TDRD3Q9H7E2 651 aaKnown RBP18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 SPON1Q9HCB6 807 aa18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 PCDHGC5Q9Y5F6 944 aa18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.03■□□□□ 0.48
CLCNKA-203ENST00000439316 GRID2IPA4D2P6 1211 aa18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 E9PMD0 336 aa18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 ZBTB5O15062 677 aa18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 PALMO75781 387 aa18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 CLSTN1O94985 981 aa18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 PLA2G4BP0C869 781 aa18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 GPATCH4Q5T3I0 446 aaKnown RBP18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 SCFD1Q8WVM8 642 aa18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 MS4A14Q96JA4 679 aa18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 GANQ9H2C0 597 aa18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 GDF3Q9NR23 364 aa18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 AIPL1Q9NZN9 384 aa18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 SWAP70Q9UH65 585 aa18.02■□□□□ 0.48
CLCNKA-203ENST00000439316 FRMD3A2A2Y4 597 aa18.02■□□□□ 0.47
CLCNKA-203ENST00000439316 MARCH6O60337 910 aa18.02■□□□□ 0.47
CLCNKA-203ENST00000439316 SSBP05455 408 aaKnown RBP eCLIP18.02■□□□□ 0.47
CLCNKA-203ENST00000439316 NAP1L1P55209 391 aaKnown RBP18.02■□□□□ 0.47
CLCNKA-203ENST00000439316 CORO7P57737 925 aa18.02■□□□□ 0.47
CLCNKA-203ENST00000439316 GPBP1Q86WP2 473 aa18.02■□□□□ 0.47
CLCNKA-203ENST00000439316 IDI2Q9BXS1 227 aa18.02■□□□□ 0.47
CLCNKA-203ENST00000439316 PLEKHA4Q9H4M7 779 aa18.02■□□□□ 0.47
CLCNKA-203ENST00000439316 PSTPIP2Q9H939 334 aa18.02■□□□□ 0.47
CLCNKA-203ENST00000439316 TBC1D7Q9P0N9 293 aa18.02■□□□□ 0.47
CLCNKA-203ENST00000439316 FAM198AQ9UFP1 575 aa18.02■□□□□ 0.47
CLCNKA-203ENST00000439316 KIAA1024Q9UPX6 916 aa18.02■□□□□ 0.47
CLCNKA-203ENST00000439316 USP17L10C9JJH3 530 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 CYP11B2P19099 503 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 KLRC1P26715 233 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 SHMT1P34896 483 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 IRAK1P51617 712 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 EDRF1Q3B7T1 1238 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 MEI1Q5TIA1 1274 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 PPP4R3CPQ6ZMV5 832 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 NELFCDQ8IXH7 590 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 IFT20Q8IY31 132 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 OGFOD1Q8N543 542 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 TBC1D5Q92609 795 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 TRIM34Q9BYJ4 488 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 KCNMB3Q9NPA1 279 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 SERPINB13Q9UIV8 391 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 MYH4Q9Y623 1939 aa18.01■□□□□ 0.47
CLCNKA-203ENST00000439316 POTEB3A0JP26 581 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 POTECB2RU33 542 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 HSF2BPO75031 334 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 MAGEA9P43362 315 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 APBA1Q02410 837 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 RAPGEF1Q13905 1077 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 POTEBQ6S5H4 581 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 INPP4AQ96PE3 977 aaPredicted RBP18■□□□□ 0.47
CLCNKA-203ENST00000439316 GRIN2DO15399 1336 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 A0A087X0T9 212 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 NPHP3-ACAD11A0A0J9YXS1 232 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 BTNL10A8MVZ5 291 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 FTCDO95954 541 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 GLI1P08151 1106 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 FAM228BP0C875 321 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 SLC16A2P36021 539 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 ASIC2Q16515 512 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 TTMPQ5BVD1 217 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 DNAJC21Q5F1R6 531 aaKnown RBP18■□□□□ 0.47
CLCNKA-203ENST00000439316 HERC4Q5GLZ8 1057 aaPredicted RBP18■□□□□ 0.47
CLCNKA-203ENST00000439316 MBOAT7Q96N66 472 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 CAPS2Q9BXY5 557 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 EMILIN3Q9NT22 766 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 HDAC9Q9UKV0 1011 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 PITPNM2Q9BZ72 1349 aa18■□□□□ 0.47
CLCNKA-203ENST00000439316 CYP3A7-CYP3A51PA0A087WV96 503 aa17.99■□□□□ 0.47
CLCNKA-203ENST00000439316 SPDYE2BA6NHP3 402 aa17.99■□□□□ 0.47
CLCNKA-203ENST00000439316 HLA-DOAP06340 250 aa17.99■□□□□ 0.47
CLCNKA-203ENST00000439316 SPDYE6P0CI01 402 aa17.99■□□□□ 0.47
CLCNKA-203ENST00000439316 SLURP2P0DP57 97 aa17.99■□□□□ 0.47
CLCNKA-203ENST00000439316 CYP3A7P24462 503 aa17.99■□□□□ 0.47
CLCNKA-203ENST00000439316 SKOR1P84550 965 aa17.99■□□□□ 0.47
CLCNKA-203ENST00000439316 KLHL30Q0D2K2 578 aa17.99■□□□□ 0.47
CLCNKA-203ENST00000439316 PAK2Q13177 524 aa17.99■□□□□ 0.47
CLCNKA-203ENST00000439316 CIAPIN1Q6FI81 312 aa17.99■□□□□ 0.47
CLCNKA-203ENST00000439316 AGBL3Q8NEM8 1001 aa17.99■□□□□ 0.47
CLCNKA-203ENST00000439316 RUFY1Q96T51 708 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms