RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 CREB1P16220 341 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 IGHMBP2P38935 993 aaKnown RBP14.61□□□□□ -0.07
ACTN1-204ENST00000438964 RCAN1P53805 252 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 PEX26Q7Z412 305 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 CCDC25Q86WR0 208 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 ERICH1Q86X53 443 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 EPS8L3Q8TE67 593 aaKnown RBP14.61□□□□□ -0.07
ACTN1-204ENST00000438964 C7orf25Q9BPX7 421 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 BCAS3Q9H6U6 928 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 DNAJC17Q9NVM6 304 aaKnown RBP14.61□□□□□ -0.07
ACTN1-204ENST00000438964 PARP4Q9UKK3 1724 aaKnown RBP14.61□□□□□ -0.07
ACTN1-204ENST00000438964 SMCO2A6NFE2 343 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 ERVV-2B6SEH9 535 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 LGR5O75473 907 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 FGFR4P22455 802 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 SLC8A1P32418 973 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 ASIC2Q16515 512 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 TCERG1LQ5VWI1 586 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 BZW1Q7L1Q6 419 aaKnown RBP14.61□□□□□ -0.07
ACTN1-204ENST00000438964 SPAG5Q96R06 1193 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 IKZF4Q9H2S9 585 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 ARPP21Q9UBL0 812 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-204ENST00000438964 PCDHGC5Q9Y5F6 944 aa14.61□□□□□ -0.07
ACTN1-204ENST00000438964 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.61□□□□□ -0.07
ACTN1-204ENST00000438964 PPP1R12AO14974 1030 aaPredicted RBP14.6□□□□□ -0.07
ACTN1-204ENST00000438964 ALDH5A1P51649 535 aaPredicted RBP14.6□□□□□ -0.07
ACTN1-204ENST00000438964 DCAF17Q5H9S7 520 aaPredicted RBP14.6□□□□□ -0.07
ACTN1-204ENST00000438964 THEMIS2Q5TEJ8 643 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 SOGA3Q5TF21 947 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 RNF217Q8TC41 542 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 SNX29Q8TEQ0 813 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 LARP4BQ92615 738 aaKnown RBP14.6□□□□□ -0.07
ACTN1-204ENST00000438964 PNMA5Q96PV4 448 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 ERVK-5Q9HDB9 667 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 KCPQ6ZWJ8 1503 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 STXBP3O00186 592 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 PGRMC1O00264 195 aaKnown RBP14.6□□□□□ -0.07
ACTN1-204ENST00000438964 AP1G2O75843 785 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 KIF5BP33176 963 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 MECOMQ03112 1051 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 SNX1Q13596 522 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 RUBCNQ92622 972 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.6□□□□□ -0.072e-13■■■■■ 158.6
ACTN1-204ENST00000438964 SEPT11Q9NVA2 429 aaKnown RBP14.6□□□□□ -0.07
ACTN1-204ENST00000438964 TSKSQ9UJT2 592 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 ANAPC4Q9UJX5 808 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 AJAP1Q9UKB5 411 aaPredicted RBP14.6□□□□□ -0.07
ACTN1-204ENST00000438964 IGF2BP3O00425 579 aaKnown RBP eCLIP14.6□□□□□ -0.071e-11■■■■□ 20.6
ACTN1-204ENST00000438964 DRP2Q13474 957 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 BICDL1Q6ZP65 573 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 SEPT14Q6ZU15 432 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 ANKRD42Q8N9B4 389 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 GDAP1Q8TB36 358 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 MAD2L2Q9UI95 211 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 COL4A3BPQ9Y5P4 624 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 LMTK3Q96Q04 1460 aa14.6□□□□□ -0.07
ACTN1-204ENST00000438964 KRT13P13646 458 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 C3orf67Q6ZVT6 689 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 SPIRE2Q8WWL2 714 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 COA7Q96BR5 231 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 MKNK2Q9HBH9 465 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 TMOD4Q9NZQ9 345 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 CEP72Q9P209 647 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 COL1A1P02452 1464 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-204ENST00000438964 SSU72P8A0A1W2PR75 194 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 M0R2N6 131 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 MYBP10242 640 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 AMPD3Q01432 767 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 SLC29A2Q14542 456 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 TNIP1Q15025 636 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 ERMARDQ5T6L9 678 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 EMC10Q5UCC4 262 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 FMNL3Q8IVF7 1028 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 FMO2Q99518 471 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 FAM129AQ9BZQ8 928 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 ZCWPW1Q9H0M4 648 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 INTS9Q9NV88 658 aaKnown RBP14.59□□□□□ -0.07
ACTN1-204ENST00000438964 FGFR1OP2Q9NVK5 253 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 C15orf41Q9Y2V0 281 aa14.59□□□□□ -0.07
ACTN1-204ENST00000438964 KRT16P08779 473 aa14.58□□□□□ -0.07
ACTN1-204ENST00000438964 EIF6P56537 245 aaKnown RBP14.58□□□□□ -0.07
ACTN1-204ENST00000438964 BIRC3Q13489 604 aa14.58□□□□□ -0.07
ACTN1-204ENST00000438964 ALKBH5Q6P6C2 394 aaKnown RBP14.58□□□□□ -0.07
ACTN1-204ENST00000438964 LRIG3Q6UXM1 1119 aa14.58□□□□□ -0.07
ACTN1-204ENST00000438964 ANKS4BQ8N8V4 417 aa14.58□□□□□ -0.07
ACTN1-204ENST00000438964 FBXO25Q8TCJ0 367 aa14.58□□□□□ -0.07
ACTN1-204ENST00000438964 U2AF1L4Q8WU68 220 aaKnown RBP14.58□□□□□ -0.07
ACTN1-204ENST00000438964 SCFD2Q8WU76 684 aa14.58□□□□□ -0.07
ACTN1-204ENST00000438964 SEMA4AQ9H3S1 761 aa14.58□□□□□ -0.07
ACTN1-204ENST00000438964 TMEM59LQ9UK28 342 aa14.58□□□□□ -0.07
ACTN1-204ENST00000438964 TRPC6Q9Y210 931 aa14.58□□□□□ -0.07
ACTN1-204ENST00000438964 PTPN22Q9Y2R2 807 aa14.58□□□□□ -0.07
ACTN1-204ENST00000438964 TMEM110-MUSTN1A8MSY1 372 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 KLRF2D3W0D1 207 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 E9PMD0 336 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 IL2RBP14784 551 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 NONOQ15233 471 aaKnown RBP eCLIP14.58□□□□□ -0.08
ACTN1-204ENST00000438964 TRPM8Q7Z2W7 1104 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 DYDC1Q8WWB3 177 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.58□□□□□ -0.085e-7■■■□□ 15.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms