RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 BACH1O14867 736 aa28.02■■■□□ 2.08
RAPGEF1-206ENST00000438647 FDPSP14324 419 aaKnown RBP28.02■■■□□ 2.08
RAPGEF1-206ENST00000438647 GRIK4Q16099 956 aa28.02■■■□□ 2.08
RAPGEF1-206ENST00000438647 TAF2Q6P1X5 1199 aa28.02■■■□□ 2.08
RAPGEF1-206ENST00000438647 ABHD15Q6UXT9 468 aa28.02■■■□□ 2.08
RAPGEF1-206ENST00000438647 IL27Q8NEV9 243 aa28.02■■■□□ 2.08
RAPGEF1-206ENST00000438647 ZSCAN31Q96LW9 406 aaPredicted RBP28.02■■■□□ 2.08
RAPGEF1-206ENST00000438647 TRPC6Q9Y210 931 aa28.02■■■□□ 2.08
RAPGEF1-206ENST00000438647 KAT6AQ92794 2004 aa28.02■■■□□ 2.08
RAPGEF1-206ENST00000438647 CYP3A7-CYP3A51PA0A087WV96 503 aa28.01■■■□□ 2.07
RAPGEF1-206ENST00000438647 IGKV6D-21A0A0A0MT36 114 aa28.01■■■□□ 2.07
RAPGEF1-206ENST00000438647 RSPH10B2B2RC85 870 aa28.01■■■□□ 2.07
RAPGEF1-206ENST00000438647 BAIAP3O94812 1187 aa28.01■■■□□ 2.07
RAPGEF1-206ENST00000438647 CXCL10P02778 98 aa28.01■■■□□ 2.07
RAPGEF1-206ENST00000438647 RSPH10BP0C881 870 aa28.01■■■□□ 2.07
RAPGEF1-206ENST00000438647 CYP3A7P24462 503 aa28.01■■■□□ 2.07
RAPGEF1-206ENST00000438647 Q4G0T1 1027 aa28.01■■■□□ 2.07
RAPGEF1-206ENST00000438647 Q7L0L9 218 aa28.01■■■□□ 2.07
RAPGEF1-206ENST00000438647 RIT2Q99578 217 aa28.01■■■□□ 2.07
RAPGEF1-206ENST00000438647 SH2B1Q9NRF2 756 aaPredicted RBP28.01■■■□□ 2.07
RAPGEF1-206ENST00000438647 TUBE1Q9UJT0 475 aa28.01■■■□□ 2.07
RAPGEF1-206ENST00000438647 MSH4O15457 936 aa28■■■□□ 2.07
RAPGEF1-206ENST00000438647 EDIL3O43854 480 aa28■■■□□ 2.07
RAPGEF1-206ENST00000438647 TRIM29Q14134 588 aa28■■■□□ 2.07
RAPGEF1-206ENST00000438647 RABEP1Q15276 862 aa28■■■□□ 2.07
RAPGEF1-206ENST00000438647 UIMC1Q96RL1 719 aa28■■■□□ 2.07
RAPGEF1-206ENST00000438647 GJB4Q9NTQ9 266 aa28■■■□□ 2.07
RAPGEF1-206ENST00000438647 JAK2O60674 1132 aa27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 DTNBO60941 627 aa27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 RPLP2P05387 115 aaKnown RBP27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 DNAJB2P25686 324 aa27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 KRT2P35908 639 aa27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 PLCB4Q15147 1175 aa27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 INF2Q27J81 1249 aa27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 CNKSR3Q6P9H4 555 aa27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 TRAF7Q6Q0C0 670 aa27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 RSPH3Q86UC2 560 aa27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 LLPHQ9BRT6 129 aaKnown RBP27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 ZNF302Q9NR11 478 aa27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 MTMR10Q9NXD2 777 aa27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 PCDHA10Q9Y5I2 948 aa27.99■■■□□ 2.07
RAPGEF1-206ENST00000438647 POTEB3A0JP26 581 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 MBLAC1A4D2B0 266 aaPredicted RBP27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 WDR64B1ANS9 1081 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 GAS7O60861 476 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 NBNO60934 754 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 PSAPP07602 524 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 INSRRP14616 1297 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 GPNMBQ14956 572 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 RAB30Q15771 203 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 PDXDC2PQ6P474 469 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 POTEBQ6S5H4 581 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 RPAINQ86UA6 219 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 CCDC60Q8IWA6 550 aaPredicted RBP27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 SLC5A5Q92911 643 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 NAP1L4Q99733 375 aaKnown RBP27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 SAMM50Q9Y512 469 aa27.98■■■□□ 2.07
RAPGEF1-206ENST00000438647 ST18O60284 1047 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 TDP2O95551 362 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 ATP2A2P16615 1042 aaKnown RBP27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 IGBP1P78318 339 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 ST3GAL1Q11201 340 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 LETM2Q2VYF4 491 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 LRCH2Q5VUJ6 765 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 SWSAP1Q6NVH7 229 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 NEK8Q86SG6 692 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 CCDC83Q8IWF9 413 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 TIFAQ96CG3 184 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 MBOAT7Q96N66 472 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 SLC9A7Q96T83 725 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 TEKT3Q9BXF9 490 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 PBX4Q9BYU1 374 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 DDX25Q9UHL0 483 aaKnown RBP27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 MSRAQ9UJ68 235 aa27.97■■■□□ 2.07
RAPGEF1-206ENST00000438647 HBP1O60381 514 aa27.96■■■□□ 2.07
RAPGEF1-206ENST00000438647 EFCAB14O75071 495 aa27.96■■■□□ 2.07
RAPGEF1-206ENST00000438647 CTSHP09668 335 aa27.96■■■□□ 2.07
RAPGEF1-206ENST00000438647 GCFC2P16383 781 aaKnown RBP27.96■■■□□ 2.07
RAPGEF1-206ENST00000438647 PIK3AP1Q6ZUJ8 805 aa27.96■■■□□ 2.07
RAPGEF1-206ENST00000438647 TET1Q8NFU7 2136 aa27.96■■■□□ 2.07
RAPGEF1-206ENST00000438647 PHOSPHO2Q8TCD6 241 aa27.96■■■□□ 2.07
RAPGEF1-206ENST00000438647 OXER1Q8TDS5 423 aa27.96■■■□□ 2.07
RAPGEF1-206ENST00000438647 ATP8B4Q8TF62 1192 aa27.96■■■□□ 2.07
RAPGEF1-206ENST00000438647 GRXCR1A8MXD5 290 aa27.95■■■□□ 2.06
RAPGEF1-206ENST00000438647 SFNP31947 248 aa27.95■■■□□ 2.06
RAPGEF1-206ENST00000438647 KCNJ6P48051 423 aa27.95■■■□□ 2.06
RAPGEF1-206ENST00000438647 MBTPS1Q14703 1052 aa27.95■■■□□ 2.06
RAPGEF1-206ENST00000438647 MARCH8Q5T0T0 291 aa27.95■■■□□ 2.06
RAPGEF1-206ENST00000438647 PPP4R3AQ6IN85 833 aa27.95■■■□□ 2.06
RAPGEF1-206ENST00000438647 CKAP2LQ8IYA6 745 aa27.95■■■□□ 2.06
RAPGEF1-206ENST00000438647 SEMA6BQ9H3T3 888 aa27.95■■■□□ 2.06
RAPGEF1-206ENST00000438647 ABHD14A-ACY1A0A1B0GW23 586 aa27.94■■■□□ 2.06
RAPGEF1-206ENST00000438647 MMP1P03956 469 aa27.94■■■□□ 2.06
RAPGEF1-206ENST00000438647 JAK3P52333 1124 aa27.94■■■□□ 2.06
RAPGEF1-206ENST00000438647 HMGN5P82970 282 aaKnown RBP27.94■■■□□ 2.06
RAPGEF1-206ENST00000438647 FAM161BQ96MY7 647 aa27.94■■■□□ 2.06
RAPGEF1-206ENST00000438647 DISC1Q9NRI5 854 aa27.94■■■□□ 2.06
RAPGEF1-206ENST00000438647 MAFBQ9Y5Q3 323 aaPredicted RBP27.94■■■□□ 2.06
RAPGEF1-206ENST00000438647 PSMD10O75832 226 aa27.93■■■□□ 2.06
RAPGEF1-206ENST00000438647 IKBKEQ14164 716 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms