RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 ADCY1Q08828 1119 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 DBPQ10586 325 aaPredicted RBP5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 TMEM132BQ14DG7 1078 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 CR1LQ2VPA4 569 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 RNF219Q5W0B1 726 aaPredicted RBP5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 CPZQ66K79 652 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 VASNQ6EMK4 673 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 POU5F2Q8N7G0 328 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 TTLL6Q8N841 843 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 KIAA1958Q8N8K9 716 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 CHTF18Q8WVB6 975 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 WRNIP1Q96S55 665 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 TMEM209Q96SK2 561 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 SGPP1Q9BX95 441 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 GCM1Q9NP62 436 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 ARHGAP28Q9P2N2 729 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 APOBEC2Q9Y235 224 aaKnown RBP5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 TCAF2A6NFQ2 919 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 ACOT7O00154 380 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 EYA4O95677 639 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 ATF2P15336 505 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 YBX3P16989 372 aaKnown RBP eCLIP5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 IGFBP6P24592 240 aaPredicted RBP5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 LSP1P33241 339 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 STAT5AP42229 794 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 TXKP42681 527 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 NCKAP1LP55160 1127 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 AMPD3Q01432 767 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 PKN1Q16512 942 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 ATP13A4Q4VNC1 1196 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 GPR158Q5T848 1215 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 IGDCC3Q8IVU1 814 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 SMARCC2Q8TAQ2 1214 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 WDR66Q8TBY9 1149 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 GPR101Q96P66 508 aaPredicted RBP5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 KCNK12Q9HB15 430 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 ASB1Q9Y576 335 aa5.25□□□□□ -1.57
LSM1P1-201ENST00000438629 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 ALG1L2C9J202 215 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 RFXAPO00287 272 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 NEMP1O14524 444 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 C8BP07358 591 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 ADCYAP1R1P41586 468 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 LRRC32Q14392 662 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 EPHA7Q15375 998 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 SKOR2Q2VWA4 1001 aaPredicted RBP5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 RGL3Q3MIN7 710 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 ZNF385BQ569K4 471 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 CD276Q5ZPR3 534 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 DPP8Q6V1X1 898 aaPredicted RBP5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 ATG14Q6ZNE5 492 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 STRA8Q7Z7C7 330 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 DDX42Q86XP3 938 aaKnown RBP eCLIP5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 ANKRD13AQ8IZ07 590 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 WDR48Q8TAF3 677 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 IGDCC4Q8TDY8 1250 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 CLIC6Q96NY7 704 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 GBP4Q96PP9 640 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 FMNL2Q96PY5 1086 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 ELF4Q99607 663 aaPredicted RBP5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 TOMM22Q9NS69 142 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 KCNG1Q9UIX4 513 aa5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 CNOT6Q9ULM6 557 aaKnown RBP5.24□□□□□ -1.57
LSM1P1-201ENST00000438629 GOLGA6L22H0YM25 854 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 DVL2O14641 736 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 RAB11FIP3O75154 756 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 TSPAN15O95858 294 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 SLC9A1P19634 815 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 CDK11BP21127 795 aaKnown RBP5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 CD40P25942 277 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 AOAHP28039 575 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 RAP1GAPP47736 663 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 EPHB3P54753 998 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 SESN3P58005 492 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 PHC1P78364 1004 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 CAP1Q01518 475 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 PFKPQ01813 784 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 STAT4Q14765 748 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 SEC23AQ15436 765 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 NECAB2Q7Z6G3 386 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 SPATS2Q86XZ4 545 aaKnown RBP5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 FAM26EQ8N5C1 309 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 LINC00482Q8N8I6 264 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 KYQ8NBH2 561 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 HIPK4Q8NE63 616 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 CALML6Q8TD86 181 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 EMC7Q9NPA0 242 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 DLL4Q9NR61 685 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 SPTLC3Q9NUV7 552 aa5.23□□□□□ -1.57
LSM1P1-201ENST00000438629 PHLDB1Q86UU1 1377 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 ZNF839A8K0R7 811 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 MAFGO15525 162 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 GPR39O43194 453 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 CHGBP05060 677 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 POU3F3P20264 500 aaPredicted RBP5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 PTGS1P23219 599 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 MC3RP41968 323 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 SMAD3P84022 425 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms