RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 PPFIA4O75335 1185 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 SREBF1P36956 1147 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 SP4Q02446 784 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 STK3Q13188 491 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 GPNMBQ14956 572 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 NPY5RQ15761 445 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 KIAA0753Q2KHM9 967 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 TRIM71Q2Q1W2 868 aaKnown RBP9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 C8orf34Q49A92 452 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 RASIP1Q5U651 963 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 JAKMIP3Q5VZ66 844 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 XRRA1Q6P2D8 792 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 ZNF365Q70YC5 407 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 SESTD1Q86VW0 696 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 GPRASP2Q96D09 838 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 ZNF274Q96GC6 653 aaPredicted RBP9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 RNPC3Q96LT9 517 aaKnown RBP9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 SLC26A6Q9BXS9 759 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 SEZ6LQ9BYH1 1024 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 ZMYND12Q9H0C1 365 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 MLXIPQ9HAP2 919 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 JADE2Q9NQC1 790 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 CXXC1Q9P0U4 656 aaPredicted RBP9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 VPS54Q9P1Q0 977 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 TPCN1Q9ULQ1 816 aa9.77□□□□□ -0.85
HERPUD2-206ENST00000438224 GSTTP1A0A1W2PQM5 241 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 LILRB3O75022 631 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 ARP10275 920 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 HOXC8P31273 242 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 AK2P54819 239 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 ANAPC15P60006 121 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 ARHGAP4P98171 946 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 PTPN11Q06124 597 aaPredicted RBP9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 SCRN1Q12765 414 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 ITGB3BPQ13352 177 aaPredicted RBP9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 PPIGQ13427 754 aaKnown RBP eCLIP9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 NEDD9Q14511 834 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 PTGISQ16647 500 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 QPCTQ16769 361 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 TRAF7Q6Q0C0 670 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 TTC13Q8NBP0 860 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 SENP7Q9BQF6 1050 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 MXRA8Q9BRK3 442 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 IL23AQ9NPF7 189 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 TRANK1O15050 2925 aa9.76□□□□□ -0.85
HERPUD2-206ENST00000438224 IGLV3-22A0A075B6J6 115 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 GRXCR1A8MXD5 290 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 FAM86B1E9PN63 330 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 CTDNEP1O95476 244 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 FOSP01100 380 aaPredicted RBP9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 FAM86B2P0C5J1 330 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 CD46P15529 392 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 ST3GAL1Q11201 340 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 AP3B2Q13367 1082 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 MTMR1Q13613 665 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 TCTN1Q2MV58 587 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 UTP14CQ5TAP6 766 aaKnown RBP9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 NLRX1Q86UT6 975 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 REXO1Q8N1G1 1221 aaKnown RBP9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 TMEM199Q8N511 208 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 UIMC1Q96RL1 719 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 PCYT2Q99447 389 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 KIF2CQ99661 725 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 OSBPL7Q9BZF2 842 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 KCNH7Q9NS40 1196 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 GJB4Q9NTQ9 266 aa9.75□□□□□ -0.85
HERPUD2-206ENST00000438224 PRUNE2Q8WUY3 3088 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 H3BRB1 525 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 M0R2N6 131 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 MEIS1O00470 390 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 NOP56O00567 594 aaKnown RBP9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 PFKFB2O60825 505 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 CCNE2O96020 404 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 CYP3A4P08684 503 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 IQCF3P0C7M6 154 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 SUPT20HL2P0C7V6 817 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 SMIM10L2AP0DMW4 78 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 SMIM10L2BP0DMW5 78 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 TCF7P36402 384 aaPredicted RBP9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 ADAM17P78536 824 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 RBL2Q08999 1139 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 MBTPS1Q14703 1052 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 CEP55Q53EZ4 464 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 GPR153Q6NV75 609 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 OTOP2Q7RTS6 562 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 DEFB128Q7Z7B8 93 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 TEX2Q8IWB9 1127 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 DEFB123Q8N688 67 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 C7orf31Q8N865 590 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 NECAB1Q8N987 351 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 HERVK_113Q902F9 699 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 LENG9Q96B70 501 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 KATNAL1Q9BW62 490 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 TTYH1Q9H313 450 aaPredicted RBP9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 RNPEPQ9H4A4 650 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 TUT1Q9H6E5 874 aaKnown RBP9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 VRTNQ9H8Y1 702 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 AGO4Q9HCK5 861 aaKnown RBP9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 C6orf50Q9HD87 102 aa9.74□□□□□ -0.85
HERPUD2-206ENST00000438224 MTMR10Q9NXD2 777 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms