RNA–Protein interactions for RNA: ENST00000437679.3

LIMS3-201, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LIMS3, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-201ENST00000437679 RSPH10B2B2RC85 870 aa17.21■□□□□ 0.35
LIMS3-201ENST00000437679 EDIL3O43854 480 aa17.21■□□□□ 0.35
LIMS3-201ENST00000437679 CAND2O75155 1236 aa17.21■□□□□ 0.35
LIMS3-201ENST00000437679 RSPH10BP0C881 870 aa17.21■□□□□ 0.35
LIMS3-201ENST00000437679 SLC26A2P50443 739 aa17.21■□□□□ 0.35
LIMS3-201ENST00000437679 ADAM17P78536 824 aa17.21■□□□□ 0.35
LIMS3-201ENST00000437679 GRIK4Q16099 956 aa17.21■□□□□ 0.35
LIMS3-201ENST00000437679 ABHD15Q6UXT9 468 aa17.21■□□□□ 0.35
LIMS3-201ENST00000437679 SMAP1Q8IYB5 467 aaPredicted RBP17.21■□□□□ 0.35
LIMS3-201ENST00000437679 LENG9Q96B70 501 aa17.21■□□□□ 0.35
LIMS3-201ENST00000437679 ZSCAN31Q96LW9 406 aaPredicted RBP17.21■□□□□ 0.35
LIMS3-201ENST00000437679 BRMS1Q9HCU9 246 aa17.21■□□□□ 0.35
LIMS3-201ENST00000437679 ZNF302Q9NR11 478 aa17.21■□□□□ 0.35
LIMS3-201ENST00000437679 GJB4Q9NTQ9 266 aa17.21■□□□□ 0.35
LIMS3-201ENST00000437679 CYP3A7-CYP3A51PA0A087WV96 503 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 IGKV6D-21A0A0A0MT36 114 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 MSH4O15457 936 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 JAK2O60674 1132 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 GAS7O60861 476 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 CXCL10P02778 98 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 CYP3A7P24462 503 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 IGBP1P78318 339 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 TRIM29Q14134 588 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 PLCB4Q15147 1175 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 RABEP1Q15276 862 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 INF2Q27J81 1249 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 Q4G0T1 1027 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 TAF2Q6P1X5 1199 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 MOXD1Q6UVY6 613 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 CCDC83Q8IWF9 413 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 RIT2Q99578 217 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 SH2B1Q9NRF2 756 aaPredicted RBP17.2■□□□□ 0.34
LIMS3-201ENST00000437679 MTMR10Q9NXD2 777 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 TUBE1Q9UJT0 475 aa17.2■□□□□ 0.34
LIMS3-201ENST00000437679 MYH9P35579 1960 aaKnown RBP17.2■□□□□ 0.34
LIMS3-201ENST00000437679 TMEM265A0A087WTH1 108 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 POTEB3A0JP26 581 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 GRXCR1A8MXD5 290 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 NBNO60934 754 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 BAIAP3O94812 1187 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 TDP2O95551 362 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 PSAPP07602 524 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 INSRRP14616 1297 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 DNAJB2P25686 324 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 KRT2P35908 639 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 GPNMBQ14956 572 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 RAB30Q15771 203 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 LETM2Q2VYF4 491 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 LRCH2Q5VUJ6 765 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 SWSAP1Q6NVH7 229 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 PDXDC2PQ6P474 469 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 CNKSR3Q6P9H4 555 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 TRAF7Q6Q0C0 670 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 POTEBQ6S5H4 581 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 PIK3AP1Q6ZUJ8 805 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 RSPH3Q86UC2 560 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 CCDC60Q8IWA6 550 aaPredicted RBP17.19■□□□□ 0.34
LIMS3-201ENST00000437679 OXER1Q8TDS5 423 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 SLC5A5Q92911 643 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 TIFAQ96CG3 184 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 FAM161BQ96MY7 647 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 TEKT3Q9BXF9 490 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 DDX25Q9UHL0 483 aaKnown RBP17.19■□□□□ 0.34
LIMS3-201ENST00000437679 MSRAQ9UJ68 235 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 SAMM50Q9Y512 469 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 PCDHA10Q9Y5I2 948 aa17.19■□□□□ 0.34
LIMS3-201ENST00000437679 MBLAC1A4D2B0 266 aaPredicted RBP17.18■□□□□ 0.34
LIMS3-201ENST00000437679 WDR64B1ANS9 1081 aa17.18■□□□□ 0.34
LIMS3-201ENST00000437679 HBP1O60381 514 aa17.18■□□□□ 0.34
LIMS3-201ENST00000437679 CTSHP09668 335 aa17.18■□□□□ 0.34
LIMS3-201ENST00000437679 ATP2A2P16615 1042 aaKnown RBP17.18■□□□□ 0.34
LIMS3-201ENST00000437679 ST3GAL1Q11201 340 aa17.18■□□□□ 0.34
LIMS3-201ENST00000437679 NEK8Q86SG6 692 aa17.18■□□□□ 0.34
LIMS3-201ENST00000437679 MBOAT7Q96N66 472 aa17.18■□□□□ 0.34
LIMS3-201ENST00000437679 NAP1L4Q99733 375 aaKnown RBP17.18■□□□□ 0.34
LIMS3-201ENST00000437679 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
LIMS3-201ENST00000437679 PBX4Q9BYU1 374 aa17.18■□□□□ 0.34
LIMS3-201ENST00000437679 SEMA6BQ9H3T3 888 aa17.18■□□□□ 0.34
LIMS3-201ENST00000437679 ST18O60284 1047 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 RPLP2P05387 115 aaKnown RBP17.17■□□□□ 0.34
LIMS3-201ENST00000437679 GCFC2P16383 781 aaKnown RBP17.17■□□□□ 0.34
LIMS3-201ENST00000437679 PBX2P40425 430 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 KCNJ6P48051 423 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 FOSBP53539 338 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 MBTPS1Q14703 1052 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 MARCH8Q5T0T0 291 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 RUFY4Q6ZNE9 571 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 RPAINQ86UA6 219 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 CKAP2LQ8IYA6 745 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 IL27Q8NEV9 243 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 PHOSPHO2Q8TCD6 241 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 ATP8B4Q8TF62 1192 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 SLC9A7Q96T83 725 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 DISC1Q9NRI5 854 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 GABBR1Q9UBS5 961 aa17.17■□□□□ 0.34
LIMS3-201ENST00000437679 ABHD14A-ACY1A0A1B0GW23 586 aa17.16■□□□□ 0.34
LIMS3-201ENST00000437679 CHMP2AO43633 222 aa17.16■□□□□ 0.34
LIMS3-201ENST00000437679 EFCAB14O75071 495 aa17.16■□□□□ 0.34
LIMS3-201ENST00000437679 MMP1P03956 469 aa17.16■□□□□ 0.34
LIMS3-201ENST00000437679 SFNP31947 248 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms