RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 FGFR1P11362 822 aa5.32□□□□□ -1.56
HMGB1P31-201ENST00000437242 POLD1P28340 1107 aa5.32□□□□□ -1.56
HMGB1P31-201ENST00000437242 EPHA5P54756 1037 aa5.32□□□□□ -1.56
HMGB1P31-201ENST00000437242 TGFB2P61812 414 aa5.32□□□□□ -1.56
HMGB1P31-201ENST00000437242 ABHD18Q0P651 414 aa5.32□□□□□ -1.56
HMGB1P31-201ENST00000437242 USP39Q53GS9 565 aaKnown RBP5.32□□□□□ -1.56
HMGB1P31-201ENST00000437242 EDAQ92838 391 aa5.32□□□□□ -1.56
HMGB1P31-201ENST00000437242 ALG1Q9BT22 464 aa5.32□□□□□ -1.56
HMGB1P31-201ENST00000437242 CSRNP2Q9H175 543 aa5.32□□□□□ -1.56
HMGB1P31-201ENST00000437242 SLC39A2Q9NP94 309 aa5.32□□□□□ -1.56
HMGB1P31-201ENST00000437242 OAZ3Q9UMX2 235 aa5.32□□□□□ -1.56
HMGB1P31-201ENST00000437242 ESYT3A0FGR9 886 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 ACOT7O00154 380 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 RAD17O75943 681 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 ZNF202O95125 648 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 PABPC1P11940 636 aaKnown RBP5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 RRADP55042 308 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 ARID5AQ03989 594 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 IFRD2Q12894 506 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 NTRK3Q16288 839 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 DDR2Q16832 855 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 ZMAT1Q5H9K5 638 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 STYK1Q6J9G0 422 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 DPP8Q6V1X1 898 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 NSMFQ6X4W1 530 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 DPH6Q7L8W6 267 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 CELF2-AS1Q8N7Q2 184 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 CD244Q9BZW8 370 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 IPPKQ9H8X2 491 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 ARHGEF4Q9NR80 690 aa5.31□□□□□ -1.56
HMGB1P31-201ENST00000437242 BLACEA4D250 179 aa5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 CR2P20023 1033 aa5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 ACO1P21399 889 aaKnown RBP5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 PTH1RQ03431 593 aa5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 TOP3AQ13472 1001 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 RNF151Q2KHN1 245 aa5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 WDR72Q3MJ13 1102 aa5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 AGBL4Q5VU57 503 aa5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 POLNQ7Z5Q5 900 aa5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 OSBP2Q969R2 916 aa5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 ZNF503Q96F45 646 aa5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 OR14A2Q96R54 314 aa5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 ARHGAP28Q9P2N2 729 aa5.3□□□□□ -1.56
HMGB1P31-201ENST00000437242 TRAV20A0A0B4J274 112 aa5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 CDC14BO60729 498 aa5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 ETV4P43268 484 aa5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 DBPQ10586 325 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 BTBD8Q5XKL5 378 aa5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 ANKS3Q6ZW76 656 aa5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 MCF2L2Q86YR7 1114 aa5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 FAM89AQ96GI7 184 aa5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 SCYL1Q96KG9 808 aa5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 DPYSL5Q9BPU6 564 aa5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 RIC8BQ9NVN3 520 aa5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 NR2E1Q9Y466 385 aa5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 SLC30A1Q9Y6M5 507 aa5.29□□□□□ -1.56
HMGB1P31-201ENST00000437242 HMGCRP04035 888 aa5.28□□□□□ -1.56
HMGB1P31-201ENST00000437242 MCM7P33993 719 aa5.28□□□□□ -1.56
HMGB1P31-201ENST00000437242 LSM12Q3MHD2 195 aaKnown RBP5.28□□□□□ -1.56
HMGB1P31-201ENST00000437242 NLGN4XQ8N0W4 816 aa5.28□□□□□ -1.56
HMGB1P31-201ENST00000437242 LRRC47Q8N1G4 583 aaKnown RBP5.28□□□□□ -1.56
HMGB1P31-201ENST00000437242 SH3RF2Q8TEC5 729 aa5.28□□□□□ -1.56
HMGB1P31-201ENST00000437242 EXTL1Q92935 676 aa5.28□□□□□ -1.56
HMGB1P31-201ENST00000437242 C12orf65Q9H3J6 166 aaKnown RBP5.28□□□□□ -1.56
HMGB1P31-201ENST00000437242 SRPK3Q9UPE1 567 aa5.28□□□□□ -1.56
HMGB1P31-201ENST00000437242 WDR33Q9C0J8 1336 aaKnown RBP5.27□□□□□ -1.57
HMGB1P31-201ENST00000437242 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P31-201ENST00000437242 PTPN1P18031 435 aaKnown RBP5.27□□□□□ -1.57
HMGB1P31-201ENST00000437242 DNAJA1P31689 397 aaKnown RBP5.27□□□□□ -1.57
HMGB1P31-201ENST00000437242 EP400NLQ6ZTU2 488 aa5.27□□□□□ -1.57
HMGB1P31-201ENST00000437242 MTDHQ86UE4 582 aaKnown RBP5.27□□□□□ -1.57
HMGB1P31-201ENST00000437242 ST13P5Q8NFI4 369 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P31-201ENST00000437242 TINF2Q9BSI4 451 aa5.27□□□□□ -1.57
HMGB1P31-201ENST00000437242 PLA2G12BQ9BX93 195 aa5.27□□□□□ -1.57
HMGB1P31-201ENST00000437242 ASXL2Q76L83 1435 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 TCRBV5S4A2TA0A5A2 114 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 ARHGAP6O43182 974 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 GJA4P35212 333 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 ADCY8P40145 1251 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 KCNQ1P51787 676 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 PAK1Q13153 545 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 NOLC1Q14978 699 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 FIGNQ5HY92 759 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 YOD1Q5VVQ6 348 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 IGFL4Q6B9Z1 124 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 ARHGAP36Q6ZRI8 547 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 Q6ZSN1 163 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 C1orf210Q8IVY1 113 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 CHFRQ96EP1 664 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 TRIM8Q9BZR9 551 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 ZDHHC5Q9C0B5 715 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 KIAA1683Q9H0B3 1180 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 C11orf21Q9P2W6 132 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 PUF60Q9UHX1 559 aaKnown RBP5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 FBXO10Q9UK96 956 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 TRAF6Q9Y4K3 522 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 ATP23Q9Y6H3 246 aa5.26□□□□□ -1.57
HMGB1P31-201ENST00000437242 FAM90A27PA6NNH2 459 aa5.25□□□□□ -1.57
HMGB1P31-201ENST00000437242 AQP7O14520 342 aa5.25□□□□□ -1.57
HMGB1P31-201ENST00000437242 NARSO43776 548 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms