RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 DHX38Q92620 1227 aaKnown RBP20.77■□□□□ 0.92
HLA-F-220ENST00000434407 HAS1Q92839 578 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 GLG1Q92896 1179 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 GJA10Q969M2 543 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 TEKT3Q9BXF9 490 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 AZI2Q9H6S1 392 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 SMC3Q9UQE7 1217 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 PCDHA10Q9Y5I2 948 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 TANC1Q9C0D5 1861 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 UMODL1Q5DID0 1318 aa20.77■□□□□ 0.91
HLA-F-220ENST00000434407 SCN5AQ14524 2016 aa20.77■□□□□ 0.91
HLA-F-220ENST00000434407 C17orf102A2RUQ5 167 aa20.76■□□□□ 0.91
HLA-F-220ENST00000434407 WNT7AO00755 349 aa20.76■□□□□ 0.91
HLA-F-220ENST00000434407 CYP2C18P33260 490 aa20.76■□□□□ 0.91
HLA-F-220ENST00000434407 PTK7Q13308 1070 aa20.76■□□□□ 0.91
HLA-F-220ENST00000434407 MIS18BP1Q6P0N0 1132 aa20.76■□□□□ 0.91
HLA-F-220ENST00000434407 SERINC5Q86VE9 423 aa20.76■□□□□ 0.91
HLA-F-220ENST00000434407 NOSTRINQ8IVI9 506 aa20.76■□□□□ 0.91
HLA-F-220ENST00000434407 CCDC60Q8IWA6 550 aaPredicted RBP20.76■□□□□ 0.91
HLA-F-220ENST00000434407 RDM1Q8NG50 284 aa20.76■□□□□ 0.91
HLA-F-220ENST00000434407 PPP1R12CQ9BZL4 782 aa20.76■□□□□ 0.91
HLA-F-220ENST00000434407 WNT8AQ9H1J5 351 aa20.76■□□□□ 0.91
HLA-F-220ENST00000434407 UNC45AQ9H3U1 944 aa20.76■□□□□ 0.91
HLA-F-220ENST00000434407 MAFBQ9Y5Q3 323 aaPredicted RBP20.76■□□□□ 0.91
HLA-F-220ENST00000434407 NRCAMQ92823 1304 aa20.76■□□□□ 0.91
HLA-F-220ENST00000434407 WDR64B1ANS9 1081 aa20.75■□□□□ 0.91
HLA-F-220ENST00000434407 KIF28PB7ZC32 967 aa20.75■□□□□ 0.91
HLA-F-220ENST00000434407 K7ELQ4 463 aaPredicted RBP20.75■□□□□ 0.91
HLA-F-220ENST00000434407 GNAT1P11488 350 aa20.75■□□□□ 0.91
HLA-F-220ENST00000434407 SFNP31947 248 aa20.75■□□□□ 0.91
HLA-F-220ENST00000434407 PLCB4Q15147 1175 aa20.75■□□□□ 0.91
HLA-F-220ENST00000434407 TRIM71Q2Q1W2 868 aaKnown RBP20.75■□□□□ 0.91
HLA-F-220ENST00000434407 FAM160B1Q5W0V3 765 aa20.75■□□□□ 0.91
HLA-F-220ENST00000434407 CAGE1Q8TC20 777 aa20.75■□□□□ 0.91
HLA-F-220ENST00000434407 INTS4Q96HW7 963 aaKnown RBP20.75■□□□□ 0.91
HLA-F-220ENST00000434407 UBE2OQ9C0C9 1292 aaKnown RBP20.75■□□□□ 0.91
HLA-F-220ENST00000434407 DISC1Q9NRI5 854 aa20.75■□□□□ 0.91
HLA-F-220ENST00000434407 SETD4Q9NVD3 440 aa20.75■□□□□ 0.91
HLA-F-220ENST00000434407 TCEAL9Q9UHQ7 104 aa20.75■□□□□ 0.91
HLA-F-220ENST00000434407 NOD1Q9Y239 953 aa20.75■□□□□ 0.91
HLA-F-220ENST00000434407 EVPLQ92817 2033 aa20.75■□□□□ 0.91
HLA-F-220ENST00000434407 PSAPP07602 524 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 ATP4AP20648 1035 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 MARK3P27448 753 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 JAK3P52333 1124 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 FPGSQ05932 587 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 PPP2R5CQ13362 524 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 BFSP2Q13515 415 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 SWSAP1Q6NVH7 229 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 TMEM199Q8N511 208 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 LMBR1Q8WVP7 490 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 ATP6V0A1Q93050 837 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 WNT8BQ93098 351 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 ZNF302Q9NR11 478 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 VAV3Q9UKW4 847 aa20.74■□□□□ 0.91
HLA-F-220ENST00000434407 MBLAC1A4D2B0 266 aaPredicted RBP20.73■□□□□ 0.91
HLA-F-220ENST00000434407 BACH1O14867 736 aa20.73■□□□□ 0.91
HLA-F-220ENST00000434407 TREHO43280 583 aa20.73■□□□□ 0.91
HLA-F-220ENST00000434407 TRAPPC10P48553 1259 aa20.73■□□□□ 0.91
HLA-F-220ENST00000434407 EPHB4P54760 987 aa20.73■□□□□ 0.91
HLA-F-220ENST00000434407 PPFIA1Q13136 1202 aa20.73■□□□□ 0.91
HLA-F-220ENST00000434407 ORC2Q13416 577 aaPredicted RBP20.73■□□□□ 0.91
HLA-F-220ENST00000434407 PPIGQ13427 754 aaKnown RBP eCLIP20.73■□□□□ 0.91
HLA-F-220ENST00000434407 CCDC155Q8N6L0 562 aa20.73■□□□□ 0.91
HLA-F-220ENST00000434407 VWCEQ96DN2 955 aa20.73■□□□□ 0.91
HLA-F-220ENST00000434407 IGSF9BQ9UPX0 1349 aa20.73■□□□□ 0.91
HLA-F-220ENST00000434407 POTEB3A0JP26 581 aa20.72■□□□□ 0.91
HLA-F-220ENST00000434407 RRN3P2A6NIE6 340 aa20.72■□□□□ 0.91
HLA-F-220ENST00000434407 CSF2RAP15509 400 aa20.72■□□□□ 0.91
HLA-F-220ENST00000434407 GRIK4Q16099 956 aa20.72■□□□□ 0.91
HLA-F-220ENST00000434407 HABP4Q5JVS0 413 aaKnown RBP20.72■□□□□ 0.91
HLA-F-220ENST00000434407 MARCH8Q5T0T0 291 aa20.72■□□□□ 0.91
HLA-F-220ENST00000434407 PDXDC2PQ6P474 469 aa20.72■□□□□ 0.91
HLA-F-220ENST00000434407 POTEBQ6S5H4 581 aa20.72■□□□□ 0.91
HLA-F-220ENST00000434407 SLFN12Q8IYM2 578 aa20.72■□□□□ 0.91
HLA-F-220ENST00000434407 ATP8B4Q8TF62 1192 aa20.72■□□□□ 0.91
HLA-F-220ENST00000434407 TNPO1Q92973 898 aaKnown RBP20.72■□□□□ 0.91
HLA-F-220ENST00000434407 MTMR9Q96QG7 549 aa20.72■□□□□ 0.91
HLA-F-220ENST00000434407 HBP1O60381 514 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 NEMFO60524 1076 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 IQCF3P0C7M6 154 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 CKBP12277 381 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 INSRRP14616 1297 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 CCL23P55773 120 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 SPIRE1Q08AE8 756 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 LARP1BQ659C4 914 aaKnown RBP20.71■□□□□ 0.91
HLA-F-220ENST00000434407 TRAF7Q6Q0C0 670 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 C16orf59Q7L2K0 433 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 RPAINQ86UA6 219 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 TDHQ8IZJ6 230 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 GABBR1Q9UBS5 961 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 SAMM50Q9Y512 469 aa20.71■□□□□ 0.91
HLA-F-220ENST00000434407 EML1O00423 815 aa20.7■□□□□ 0.9
HLA-F-220ENST00000434407 CHMP2AO43633 222 aa20.7■□□□□ 0.9
HLA-F-220ENST00000434407 ZNF862O60290 1169 aa20.7■□□□□ 0.9
HLA-F-220ENST00000434407 BAG4O95429 457 aaKnown RBP20.7■□□□□ 0.9
HLA-F-220ENST00000434407 SELPP16109 830 aa20.7■□□□□ 0.9
HLA-F-220ENST00000434407 TOB1P50616 345 aaPredicted RBP20.7■□□□□ 0.9
HLA-F-220ENST00000434407 GNL2Q13823 731 aaKnown RBP20.7■□□□□ 0.9
HLA-F-220ENST00000434407 CALCRLQ16602 461 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms